RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 S1PR2O95136 353 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 HAND1O96004 215 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 CNN3Q15417 329 aaKnown RBP7.84□□□□□ -1.15
CAPN3-201ENST00000318023 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 PLCXD3Q63HM9 321 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 ZNF295-AS1Q8N0V1 137 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 BORCS7Q96B45 105 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 ATP6V0BQ99437 205 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 SPIN2AQ99865 258 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 SPIN2BQ9BPZ2 258 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 CRIM1Q9NZV1 1036 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 GAGE10A6NGK3 116 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 M0R1X1 148 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 ANGPTL7O43827 346 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 IGLC1P0CG04 106 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 FCGR2AP12318 317 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 OTX1P32242 354 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-201ENST00000318023 ID3Q02535 119 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 DEFB125Q8N687 156 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 OR8B12Q8NGG6 310 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 RNF133Q8WVZ7 376 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 PRRC2AP48634 2157 aaKnown RBP7.84□□□□□ -1.15
CAPN3-201ENST00000318023 F8P00451 2351 aa7.84□□□□□ -1.15
CAPN3-201ENST00000318023 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 VENTXO95231 258 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 PGCP20142 388 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ATP5G3P48201 142 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 PHYHD1Q5SRE7 291 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF808Q8N4W9 903 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF525Q8N782 197 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 CCDC71LQ8N9Z2 235 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 TXNIPQ9H3M7 391 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 GP6Q9HCN6 339 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 MED29Q9NX70 200 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-201ENST00000318023 TRBV20OR9-2A0A075B6H5 130 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 A0A0G2JRQ6 117 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 COX6B1P14854 86 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 NPBWR2P48146 333 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 KRTAP10-9P60411 292 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 GNB1P62873 340 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ACSM6Q6P461 480 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 GGNQ86UU5 652 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 TUSC5Q8IXB3 177 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 OR10P1Q8NGE3 313 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF48Q96MX3 618 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-201ENST00000318023 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 SMPXQ9UHP9 88 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 LHFPL6Q9Y693 200 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 STAG3L3P0CL85 134 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF121P58317 390 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-201ENST00000318023 Q0VG73 95 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 CRIP3Q6Q6R5 217 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 ZDHHC23Q8IYP9 409 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 BATF2Q8N1L9 274 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 STPG3Q8N7X2 389 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 EMC6Q9BV81 110 aa7.83□□□□□ -1.16
CAPN3-201ENST00000318023 TMED7-TICAM2A0A0A6YYA0 188 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 SIRPB1O00241 398 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
CAPN3-201ENST00000318023 SERPINE2P07093 398 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 MSR1P21757 451 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-201ENST00000318023 GABRA6Q16445 453 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 TMEM211Q6ICI0 200 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 OR5D13Q8NGL4 314 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 C11orf40Q8WZ69 217 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 HOXB13Q92826 284 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-201ENST00000318023 OR4C12Q96R67 309 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 TMEM38BQ9NVV0 291 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 PLCE1Q9P212 2302 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
CAPN3-201ENST00000318023 C17orf112F2Z3M2 114 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 SRIP30626 198 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 PRSS12P56730 875 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 PRDM14Q9GZV8 571 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 NPVFQ9HCQ7 196 aa7.82□□□□□ -1.16
CAPN3-201ENST00000318023 A0A087X0K7 114 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 FAM231BA6NCW3 169 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SPRY1O43609 319 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 PPYP01298 95 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 UCP1P25874 307 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SPATA12Q7Z6I5 190 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 PSMG3Q9BT73 122 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 HRNRQ86YZ3 2850 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 RAMP3O60896 148 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 CKS1BP61024 79 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 RPS16P62249 146 aaKnown RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SERF2P84101 59 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 TGFBR3Q03167 851 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 LRRC75BQ2VPJ9 315 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 DNM1P34Q6PK57 102 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 OR10G8Q8NGN5 311 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 OR4A5Q8NH83 315 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 TSKUQ8WUA8 353 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 APOBEC3DQ96AK3 386 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 PPP1R3CQ9UQK1 317 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms