RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FCN1O00602 326 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 RAB29O14966 203 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 NXPH2O95156 264 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 CLDN14O95500 239 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 FRMD6-AS1P0C7T7 363 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 IER3P46695 156 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 PCP4P48539 62 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 IL36BQ9NZH7 164 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 KCNIP1Q9NZI2 227 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 DUSP13Q9UII6 198 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 KRTDAPP60985 99 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 ZBTB34Q8NCN2 500 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 GALMQ96C23 342 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 TFF1P04155 84 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 COL5A1-AS1Q5SY13 56 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 Q6ZR03 302 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
SCAMP4-201ENST00000316097 SNURFLB1AK76 121 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 C12orf77C9JDV5 145 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 RRHO14718 337 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 RAB7AP51149 207 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 TMEM249Q2WGJ8 235 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 RTL8AQ9BWD3 113 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 SFXN3Q9BWM7 321 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 K7EN84 100 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 SH2D1BO14796 132 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 SIAH2O43255 324 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 TIMM8AO60220 97 aaPredicted RBP14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 C11orf42Q8N5U0 333 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 IQCF6A8MYZ5 107 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 TCF21O43680 179 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 PRAMEF6Q5VXH4 476 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 SIGLECL1Q8N7X8 197 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 PPIAL4AQ9Y536 164 aa14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 YTHDF2Q9Y5A9 579 aaKnown RBP14.18□□□□□ -0.14
SCAMP4-201ENST00000316097 TPRP12270 2363 aaKnown RBP14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 PSPNO60542 156 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 STAG3L2P0CL84 134 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 STAG3L3P0CL85 134 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 ERVK11-1P61568 191 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 PDLIM3Q53GG5 364 aaPredicted RBP14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 TIMM23BQ5SRD1 257 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 MIC13Q5XKP0 118 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 NINJ1Q92982 152 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 CACNA1DQ01668 2161 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 LINC00473A8K010 186 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 WNT9BO14905 357 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 RPL31P62899 125 aaKnown RBP14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 MMDQ15546 238 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 Q8IYB0 196 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 TXNDC17Q9BRA2 123 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 DNAJC4Q9NNZ3 241 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 POLDIP2Q9Y2S7 368 aa14.17□□□□□ -0.14
SCAMP4-201ENST00000316097 DIRC3C9JPN6 131 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 CXorf1O96002 111 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 HBZP02008 142 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 CHRNB4P30926 498 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 LGALS4P56470 323 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 OR4B1Q8NGF8 309 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 CHODLQ9H9P2 273 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 ZFP30Q9Y2G7 519 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 ROS1P08922 2347 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 ITPR1Q14643 2758 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 J3QW42 95 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 Q0VG73 95 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 TREML4Q6UXN2 200 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 GNB4Q9HAV0 340 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 ZNF586Q9NXT0 402 aa14.16□□□□□ -0.14
SCAMP4-201ENST00000316097 TRAV9-1A0A075B6T8 112 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 IGHV3-43A0A0B4J1X8 118 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 HAND1O96004 215 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 OR9G9P0C7N8 305 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 IGHV3-43DP0DP04 118 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 COL8A2P25067 703 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 AESQ08117 197 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 ZNF146Q15072 292 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 ZNF718Q3SXZ3 478 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 SPRNQ5BIV9 151 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 MGST2Q99735 147 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 SPINK4O60575 86 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 OPRK1P41145 380 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 RPEL1Q2QD12 228 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 SPATA45Q537H7 98 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 MMD2Q8IY49 270 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 OR8I2Q8N0Y5 310 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 Q8N976 141 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 MRGPRDQ8TDS7 321 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 SLC35E1Q96K37 410 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 ZNF835Q9Y2P0 537 aa14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 TBL2Q9Y4P3 447 aaKnown RBP14.15□□□□□ -0.14
SCAMP4-201ENST00000316097 GPX1P07203 203 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 C11orf53Q8IXP5 236 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 SSMEM1Q8WWF3 244 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 GGTLC1Q9BX51 225 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 MS4A5Q9H3V2 200 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 TRGV8A0A0C4DH27 118 aa14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 SUMO1P63165 101 aaKnown RBP14.14□□□□□ -0.15
SCAMP4-201ENST00000316097 RNF2Q99496 336 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms