RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PSENENQ9NZ42 101 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 MLXQ9UH92 298 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 SLC7A11Q9UPY5 501 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 TEX22C9J3V5 150 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 DDTP30046 118 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 PSMB3P49720 205 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 PKIAP61925 76 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 NUTF2P61970 127 aaKnown RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 MRPS11P82912 194 aaKnown RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 TLE4Q04727 773 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 SLC38A11Q08AI6 406 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF714Q96N38 554 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 RCHY1Q96PM5 261 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 HSD17B10Q99714 261 aaKnown RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 PBDC1Q9BVG4 233 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 BOKQ9UMX3 212 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 WDR1O75083 606 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 MPDU1O75352 247 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 IGLV1-47P01700 117 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 P04436 131 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 SAA2P0DJI9 122 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 NDUFB7P17568 137 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM177Q53S58 311 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 APH1AQ96BI3 265 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 SPIN2AQ99865 258 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 SPIN2BQ9BPZ2 258 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 OBP2BQ9NPH6 170 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 KAAG1Q9UBP8 84 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 MRPL33O75394 65 aaKnown RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 HBE1P02100 147 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 GP9P14770 177 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 ADMP35318 185 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 CX3CL1P78423 397 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 LBHQ53QV2 105 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-201ENST00000315544 LY6G5BQ8NDX9 201 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 FAM168AQ92567 244 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 GPER1Q99527 375 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
CNOT4-201ENST00000315544 APCP25054 2843 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 H0YJW9 148 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 SNRPCP09234 159 aaKnown RBP6.25□□□□□ -1.41
CNOT4-201ENST00000315544 MYOD1P15172 320 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 GDF1P27539 372 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 UQCRFS1P47985 274 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 PRCDQ00LT1 54 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 AESQ08117 197 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 BTNL3Q6UXE8 466 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 MOB3BQ86TA1 216 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 ZADH2Q8N4Q0 377 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 OR1L8Q8NGR8 309 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 HIST1H2AAQ96QV6 131 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 TXNDC17Q9BRA2 123 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 BET1LQ9NYM9 111 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 U3KQK5 164 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 PGPEP1LA6NFU8 196 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 SYNGR4O95473 234 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 TAGLN2P37802 199 aaKnown RBP6.25□□□□□ -1.41
CNOT4-201ENST00000315544 CDKN1AP38936 164 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF787Q6DD87 383 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 DEFB125Q8N687 156 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 DNAJC13O75165 2243 aa6.25□□□□□ -1.41
CNOT4-201ENST00000315544 DMRTA1Q5VZB9 504 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 FAM234AQ9H0X4 552 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 NIT2Q9NQR4 276 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 GAR1Q9NY12 217 aaKnown RBP6.24□□□□□ -1.41
CNOT4-201ENST00000315544 CTSZQ9UBR2 303 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 SPTBN2O15020 2390 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 IGLC7A0M8Q6 106 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 ANKRD30BLA7E2S9 258 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 GYPAP02724 150 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 SPCS3P61009 180 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 WT1-ASQ06250 92 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 OR5I1Q13606 314 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 MEX3BQ6ZN04 569 aaKnown RBP6.24□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF695Q8IW36 515 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 DTD1Q8TEA8 209 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 SFRP2Q96HF1 295 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 RHOVQ96L33 236 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 PCGF1Q9BSM1 259 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 HPRT1P00492 218 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 LRRC29Q8WV35 223 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 ELL3Q9HB65 397 aaPredicted RBP6.24□□□□□ -1.41
CNOT4-201ENST00000315544 NAV3Q8IVL0 2385 aa6.24□□□□□ -1.41
CNOT4-201ENST00000315544 SCO2A0A1W2PP80 73 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TRAPPC2LH3BP13 241 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 CYB5BO43169 146 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM241Q24JQ0 296 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 RPL39P5Q59GN2 51 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
CNOT4-201ENST00000315544 Q8N6K4 173 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 S100PBPQ96BU1 408 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 EAF1Q96JC9 268 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms