RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TIMP3P35625 211 aa10.07□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF362Q5T0B9 420 aaPredicted RBP10.07□□□□□ -0.8
AMBRA1-201ENST00000314845 RNASEH2CQ8TDP1 164 aaKnown RBP10.07□□□□□ -0.8
AMBRA1-201ENST00000314845 YPEL2Q96QA6 119 aa10.07□□□□□ -0.8
AMBRA1-201ENST00000314845 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
AMBRA1-201ENST00000314845 KIF26BQ2KJY2 2108 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 RALGAPA2Q2PPJ7 1873 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 TRGC2P03986 189 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 AMY1AP04745 511 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 ICAM4Q14773 271 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 RCC1LQ96I51 464 aaKnown RBP10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 HSPB9Q9BQS6 159 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 NPCDR1Q9BY65 106 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 IL18BPO95998 194 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 LINC00271P0C7V0 271 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 NMUP48645 174 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 GPR82Q96P67 336 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 SPRR3Q9UBC9 169 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 LYPD3O95274 346 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 NUDT3O95989 172 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 HERPUD1Q15011 391 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
AMBRA1-201ENST00000314845 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 CCL3L1P16619 93 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 TMEM70Q9BUB7 260 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 A6NJY4 79 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 PSME4Q14997 1843 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF207O43670 478 aaKnown RBP10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 VENTXO95231 258 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 Q5BKY6 102 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 PLPPR1Q8TBJ4 325 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 RARRES2Q99969 163 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 FOXA2Q9Y261 457 aaPredicted RBP10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 PINLYPA6NC86 204 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 PMCHL1Q16048 86 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
AMBRA1-201ENST00000314845 THBDP07204 575 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 GPR183P32249 361 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 NHLRC3Q5JS37 347 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 MBNL2Q5VZF2 373 aaKnown RBP10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 MED12Q93074 2177 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 NBR2O15453 112 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 FHITP49789 147 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 JMJD8Q96S16 334 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 LCTP09848 1927 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF56Q15929 161 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF506Q5JVG8 444 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 SDHCQ99643 169 aaPredicted RBP10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
AMBRA1-201ENST00000314845 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 CEACAM4O75871 244 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 IGKV3-20P01619 116 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 IGFBP2P18065 325 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 LY6DQ14210 128 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 COX6CP09669 75 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 NEU1Q99519 415 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 MYO7BQ6PIF6 2116 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 MESP1Q9BRJ9 268 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 PLSCR4Q9NRQ2 329 aa10.03□□□□□ -0.8
AMBRA1-201ENST00000314845 H7C1H1 209 aa10.02□□□□□ -0.8
AMBRA1-201ENST00000314845 SRIP30626 198 aa10.02□□□□□ -0.8
AMBRA1-201ENST00000314845 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.8
AMBRA1-201ENST00000314845 OR52E5Q8NH55 327 aa10.02□□□□□ -0.8
AMBRA1-201ENST00000314845 UPK2O00526 184 aa10.02□□□□□ -0.81
AMBRA1-201ENST00000314845 TBR1Q16650 682 aa10.02□□□□□ -0.81
AMBRA1-201ENST00000314845 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
AMBRA1-201ENST00000314845 FAM89BQ8N5H3 189 aa10.02□□□□□ -0.81
AMBRA1-201ENST00000314845 OR1P1Q8NH06 330 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms