RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 OPN1MW2P0DN77 364 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 OPN1MW3P0DN78 364 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 IGHV4-38-2P0DP08 117 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 SULT1A1P50225 295 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 F2RL1P55085 397 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 HSPE1P61604 102 aaKnown RBP5.57□□□□□ -1.52
PTCD2-201ENST00000308077 RPL8P62917 257 aaKnown RBP5.57□□□□□ -1.52
PTCD2-201ENST00000308077 BAXQ07812 192 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 VMA21Q3ZAQ7 101 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 C10orf55Q5SWW7 151 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 BRD3OSQ6XYD6 125 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 TMEM217Q8N7C4 229 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 OR5C1Q8NGR4 320 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 OR4A5Q8NH83 315 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 VSTM2AQ8TAG5 236 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 TMEM170AQ8WVE7 144 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 MALSU1Q96EH3 234 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 C7orf69Q9H7B7 122 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 ZNF257Q9Y2Q1 563 aa5.57□□□□□ -1.52
PTCD2-201ENST00000308077 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.56□□□□□ -1.524e-11■■■■■ 35.7
PTCD2-201ENST00000308077 PRRC2AP48634 2157 aaKnown RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 IFNA7P01567 189 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 NMBP08949 121 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 FGF2P09038 288 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 HOXA1P49639 335 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 PRCDQ00LT1 54 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 HNF4GQ14541 408 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 CLINT1Q14677 625 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 NDUFA5Q16718 116 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 TMEM249Q2WGJ8 235 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 KLF17Q5JT82 389 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 FAM120AOSQ5T036 256 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 CCDC144NLQ6NUI1 221 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 Q8N6K4 173 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 TEX45Q8NA69 505 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 WFDC11Q8NEX6 87 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 EAF1Q96JC9 268 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 CIB3Q96Q77 187 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 RNF5Q99942 180 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 FBXL15Q9H469 300 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 SIGLEC9Q9Y336 463 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 SOX21Q9Y651 276 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 ANKRD34BA5PLL1 514 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 LINC00862A6NCI5 91 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 NDUFA3O95167 84 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 MOSP00540 346 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 TPT1P13693 172 aaKnown RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 GATA3P23771 443 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 SSBP2P81877 361 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 EBI3Q14213 229 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 MMDQ15546 238 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 PRSS8Q16651 343 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 CLLU1Q5K131 121 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 STX12Q86Y82 276 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 BAP18Q8IXM2 172 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 STPG2Q8N412 459 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 OR10W1Q8NGF6 305 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 OR5B3Q8NH48 314 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 SCARB1Q8WTV0 552 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 CLCC1Q96S66 551 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 TSNAXQ99598 290 aaKnown RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 HINT2Q9BX68 163 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 ARV1Q9H2C2 271 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 NDUFA4L2Q9NRX3 87 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 FKBP11Q9NYL4 201 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 METTL1Q9UBP6 276 aaKnown RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 STRAPQ9Y3F4 350 aaKnown RBP5.56□□□□□ -1.52
PTCD2-201ENST00000308077 RFNGQ9Y644 331 aa5.56□□□□□ -1.52
PTCD2-201ENST00000308077 A0A0U1RQK1 487 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 FCN1O00602 326 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 RRHO14718 337 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 NBR2O15453 112 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 TGFAP01135 160 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 HES1Q14469 280 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 OR8G2PQ6IF36 304 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 CIARTQ8N365 385 aaPredicted RBP5.55□□□□□ -1.52
PTCD2-201ENST00000308077 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 NPBQ8NG41 125 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 OR1S2Q8NGQ3 325 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 OR1L8Q8NGR8 309 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 OR2T10Q8NGZ9 312 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 ATP5SQ99766 215 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 COMMD5Q9GZQ3 224 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 HIPK2Q9H2X6 1198 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 PLEKHA3Q9HB20 300 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
PTCD2-201ENST00000308077 CACFD1Q9UGQ2 172 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 KMT2CQ8NEZ4 4911 aaKnown RBP5.55□□□□□ -1.52
PTCD2-201ENST00000308077 PRSS46E5RG02 174 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 JTBO76095 146 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 IFNA10P01566 189 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 SLC38A11Q08AI6 406 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 TNXAQ16473 311 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 PPP1R27Q86WC6 154 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 MMD2Q8IY49 270 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 TMED6Q8WW62 240 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 PHYHIPLQ96FC7 376 aa5.55□□□□□ -1.52
PTCD2-201ENST00000308077 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms