RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 FAM210BQ96KR6 192 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 LOC105371242A0A075B767 164 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 SOX15O60248 233 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 IGLV1-47P01700 117 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 DLX1P56177 255 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 SNRPEP62304 92 aaKnown RBP11.58□□□□□ -0.56
C9orf3-202ENST00000297979 TLE4Q04727 773 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 PDPNQ86YL7 162 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 MMP26Q9NRE1 261 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 RUNX1Q01196 453 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 SCGB2A2Q13296 93 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 BEND2Q8NDZ0 799 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 TCF19Q9Y242 345 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 SRRM4A7MD48 611 aaKnown RBP11.57□□□□□ -0.56
C9orf3-202ENST00000297979 C1QL1O75973 258 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 ARG1P05089 322 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-202ENST00000297979 SCGB1C1Q8TD33 95 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 LHX4Q969G2 390 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
C9orf3-202ENST00000297979 BET1LQ9NYM9 111 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 DCHS2Q6V1P9 2916 aa11.57□□□□□ -0.56
C9orf3-202ENST00000297979 PMS2P5A8MQ11 134 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 UPK2O00526 184 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 IFNA10P01566 189 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 PRH1P02810 166 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 COX7A1P24310 79 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 DDTP30046 118 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 F2RL1P55085 397 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 IL34Q6ZMJ4 242 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 UMAD1C9J7I0 102 aa11.56□□□□□ -0.56
C9orf3-202ENST00000297979 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 PINX1Q96BK5 328 aaKnown RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-202ENST00000297979 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 KRBOX1C9JBD0 128 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 M0R1W7 72 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 UQCC3Q6UW78 93 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 PUSL1Q8N0Z8 303 aaKnown RBP11.55□□□□□ -0.56
C9orf3-202ENST00000297979 Q8N7P7 452 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 GGACTQ9BVM4 153 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 AMMECR1Q9Y4X0 333 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-202ENST00000297979 OR51B2Q9Y5P1 312 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 BUB1B-PAK6H3BSN5 160 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 M0QZK8 103 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 CD1BP29016 333 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 PJVKQ0ZLH3 352 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 IGFBPL1Q8WX77 278 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 UBE2L5PA0A1B0GUS4 154 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 FHITP49789 147 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 ARF6P62330 175 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 ZNF616Q08AN1 781 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 PNKDQ8N490 385 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 OR4P4Q8NGL7 312 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 LYPD6BQ8NI32 183 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
C9orf3-202ENST00000297979 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
C9orf3-202ENST00000297979 KBTBD11O94819 623 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 BRI3O95415 125 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 IGHV2-5P01817 119 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 OR8U8P0C7N1 319 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 STAG3L2P0CL84 134 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 PAX6P26367 422 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
C9orf3-202ENST00000297979 RNF2Q99496 336 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 ZNF430Q9H8G1 570 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-202ENST00000297979 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 AKR1C8PQ5T2L2 129 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 ZFP82Q8N141 532 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 CCL19Q99731 98 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 UQCC1Q9NVA1 299 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
C9orf3-202ENST00000297979 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
C9orf3-202ENST00000297979 PSMG3Q9BT73 122 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms