RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
RFC4-201ENST00000296273 GAL3ST2Q9H3Q3 398 aa8.36□□□□□ -1.07
RFC4-201ENST00000296273 LINC00574Q9H8X3 128 aa8.36□□□□□ -1.07
RFC4-201ENST00000296273 OR2S2Q9NQN1 319 aa8.36□□□□□ -1.07
RFC4-201ENST00000296273 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
RFC4-201ENST00000296273 WSB1Q9Y6I7 421 aa8.36□□□□□ -1.07
RFC4-201ENST00000296273 OOSP1A8MZH6 123 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 C15orf65H3BRN8 121 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
RFC4-201ENST00000296273 DFFBO76075 338 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 AMY1AP04745 511 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 M6PRP20645 277 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 CD24P25063 80 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 MYCNOSP40205 109 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 SULT1A2P50226 295 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 Q3ZCU0 254 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 TOR2AQ5JU69 321 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 C10orf99Q6UWK7 81 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 HEPN1Q6WQI6 88 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 PRR18Q8N4B5 295 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 TPRX1Q8N7U7 411 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 DMBX1Q8NFW5 382 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 OR1L1Q8NH94 360 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 SMIM8Q96KF7 97 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 GINS3Q9BRX5 216 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 PARP11Q9NR21 331 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 TAS2R3Q9NYW6 316 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 FBXL17Q9UF56 701 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 RCL1Q9Y2P8 373 aaKnown RBP8.35□□□□□ -1.07
RFC4-201ENST00000296273 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
RFC4-201ENST00000296273 TRGV10A0A0A0MS01 117 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 ZNF729A6NN14 1252 aaPredicted RBP8.35□□□□□ -1.07
RFC4-201ENST00000296273 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 TOR1AO14656 332 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 FAM106CPP0CH98 169 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 GLIPR1P48060 266 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 EIF4EBP1Q13541 118 aaPredicted RBP8.35□□□□□ -1.07
RFC4-201ENST00000296273 STX12Q86Y82 276 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 MRGPRDQ8TDS7 321 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 GNPNAT1Q96EK6 184 aaPredicted RBP8.35□□□□□ -1.07
RFC4-201ENST00000296273 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 P2RX4Q99571 388 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 MOB4Q9Y3A3 225 aa8.35□□□□□ -1.07
RFC4-201ENST00000296273 TENM3Q9P273 2699 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 KBTBD11-OT1A0A1B0GTJ5 212 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 BUB1B-PAK6H3BSN5 160 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 MMP23AO75900 390 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 CGB3P0DN86 165 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 CGB7P0DN87 165 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 AKR1C2P52895 323 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 PRRX1P54821 245 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 SLC35B1P78383 322 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
RFC4-201ENST00000296273 HLA-DRB5Q30154 266 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 MORN2Q502X0 79 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
RFC4-201ENST00000296273 DPPA3Q6W0C5 159 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 THNSL2Q86YJ6 484 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 SPAG16Q8N0X2 631 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 OR13A1Q8NGR1 328 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 GPR146Q96CH1 333 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 CXorf58Q96LI9 332 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 CIB3Q96Q77 187 aaPredicted RBP8.34□□□□□ -1.07
RFC4-201ENST00000296273 AIFM2Q9BRQ8 373 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 OR2D2Q9H210 308 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
RFC4-201ENST00000296273 GNG12Q9UBI6 72 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 PRELID3BQ9Y3B1 194 aa8.34□□□□□ -1.07
RFC4-201ENST00000296273 DSCAML1Q8TD84 2053 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 A0A087X0M5 115 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 A0A1B0GX30 115 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
RFC4-201ENST00000296273 ZNF705EA8MWA4 302 aaPredicted RBP8.33□□□□□ -1.08
RFC4-201ENST00000296273 RAB29O14966 203 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 TNFSF12O43508 249 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 SYNGR2O43760 224 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 SPP1P10451 314 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 LPAR6P43657 344 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 GPR12P47775 334 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 CAV2P51636 162 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 F2RL1P55085 397 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 HBG1P69891 147 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 HBG2P69892 147 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 TAGLNQ01995 201 aaKnown RBP8.33□□□□□ -1.08
RFC4-201ENST00000296273 ZNF585BQ52M93 769 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 TPTE2P1Q5T6R2 138 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 PRAMEF5Q5TYX0 476 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 C8orf86Q6ZUL3 223 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 ZNF329Q86UD4 541 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 KLHL30-AS1Q8NEE0 82 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 OR52L2PQ8NGH6 319 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 TMED6Q8WW62 240 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 AGMATQ9BSE5 352 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 PARD6GQ9BYG4 376 aaPredicted RBP8.33□□□□□ -1.08
RFC4-201ENST00000296273 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
RFC4-201ENST00000296273 CALYQ9NYX4 217 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms