RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 CACNG5Q9UF02 275 aa17.7■□□□□ 0.42
LINC01116-201ENST00000295549 A0A1B0GU03 582 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 ELANEP08246 267 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 TRAPPC2P0DI81 140 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 TRAPPC2BP0DI82 140 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 SULT1A3P0DMM9 295 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 SULT1A4P0DMN0 295 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 SLC25A6P12236 298 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 FOXE3Q13461 319 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 TTC9CQ8N5M4 171 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 RNF152Q8N8N0 203 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 OR4X2Q8NGF9 303 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 CITED1Q99966 193 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 GPN1Q9HCN4 374 aaPredicted RBP17.69■□□□□ 0.42
LINC01116-201ENST00000295549 CACFD1Q9UGQ2 172 aa17.69■□□□□ 0.42
LINC01116-201ENST00000295549 A0A1W2PN81 502 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 HMX3A6NHT5 357 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 SOX15O60248 233 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 HOXB5P09067 269 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 PSMB8P28062 276 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 CHRNA7P36544 502 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 HSD17B13Q7Z5P4 300 aaPredicted RBP17.68■□□□□ 0.42
LINC01116-201ENST00000295549 OR52E5Q8NH55 327 aa17.68■□□□□ 0.42
LINC01116-201ENST00000295549 IGLC7A0M8Q6 106 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 SNRPGP15A8MWD9 76 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 ST8SIA3O43173 380 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 FBXO24O75426 580 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 APELAP0DMC3 54 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 PRCDQ00LT1 54 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 CD83Q01151 205 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 SMCO1Q147U7 214 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 TCTEX1D4Q5JR98 221 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 GGNBP1Q5YKI7 109 aa17.67■□□□□ 0.42
LINC01116-201ENST00000295549 C12orf45Q8N5I9 185 aaPredicted RBP17.67■□□□□ 0.42
LINC01116-201ENST00000295549 FAM110DQ8TAY7 271 aaPredicted RBP17.67■□□□□ 0.42
LINC01116-201ENST00000295549 NPIPB5A8MRT5 1133 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 ADAP1O75689 374 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 BRI3O95415 125 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 IFNA21P01568 189 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 CD28P10747 220 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 SRSF4Q08170 494 aaKnown RBP17.66■□□□□ 0.42
LINC01116-201ENST00000295549 OXA1LQ15070 435 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 PDLIM3Q53GG5 364 aaPredicted RBP17.66■□□□□ 0.42
LINC01116-201ENST00000295549 OR5T1Q8NG75 326 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 ANK2Q01484 3957 aa17.66■□□□□ 0.42
LINC01116-201ENST00000295549 H3BUA1 57 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 IFNA17P01571 189 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 CRYGCP07315 174 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 AREGP15514 252 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 SPCS3P61009 180 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 CXorf66Q5JRM2 361 aaPredicted RBP17.65■□□□□ 0.42
LINC01116-201ENST00000295549 SHISA2Q6UWI4 295 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 OR10W1Q8NGF6 305 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 SPATA3Q8NHX4 192 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 PDCD10Q9BUL8 212 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 HINT2Q9BX68 163 aa17.65■□□□□ 0.42
LINC01116-201ENST00000295549 PITX3O75364 302 aa17.64■□□□□ 0.42
LINC01116-201ENST00000295549 PSMB6P28072 239 aa17.64■□□□□ 0.42
LINC01116-201ENST00000295549 WT1-ASQ06250 92 aa17.64■□□□□ 0.42
LINC01116-201ENST00000295549 MRPL41Q8IXM3 137 aaKnown RBP17.64■□□□□ 0.42
LINC01116-201ENST00000295549 C11orf44Q8N8P7 122 aa17.64■□□□□ 0.42
LINC01116-201ENST00000295549 INS-IGF2F8WCM5 200 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 CTRB1P17538 263 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 RAB9AP51151 201 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 CTRB2Q6GPI1 263 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 TMEM65Q6PI78 240 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 KLK15Q9H2R5 256 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 SLA2Q9H6Q3 261 aa17.64■□□□□ 0.41
LINC01116-201ENST00000295549 OR13C7P0DN81 318 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 TATDN3Q17R31 274 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 UXS1Q8NBZ7 420 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 MYOZ3Q8TDC0 251 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 CITED2Q99967 270 aaPredicted RBP17.63■□□□□ 0.41
LINC01116-201ENST00000295549 PLEKHA3Q9HB20 300 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 ZFP57Q9NU63 452 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 HSPB7Q9UBY9 170 aa17.63■□□□□ 0.41
LINC01116-201ENST00000295549 TCRBV4S1A1TA0A5B7 111 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 C7orf66A4D0T2 115 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 MPTX1A8MV57 137 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 RPLP1P05386 114 aaKnown RBP17.62■□□□□ 0.41
LINC01116-201ENST00000295549 PF4V1P10720 104 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 KLK9Q2XQG4 91 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 OR1S1Q8NH92 325 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 ZNF355PQ9NSJ1 428 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 KLK9Q9UKQ9 250 aa17.62■□□□□ 0.41
LINC01116-201ENST00000295549 TSSC4Q9Y5U2 329 aaPredicted RBP17.62■□□□□ 0.41
LINC01116-201ENST00000295549 TNFRSF9Q07011 255 aa17.61■□□□□ 0.41
LINC01116-201ENST00000295549 KIAA0141Q14154 515 aaPredicted RBP17.61■□□□□ 0.41
LINC01116-201ENST00000295549 LCNL1Q6ZST4 164 aa17.61■□□□□ 0.41
LINC01116-201ENST00000295549 OR2C3Q8N628 320 aa17.61■□□□□ 0.41
LINC01116-201ENST00000295549 TRBV9A0A0B4J1U6 114 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 FAM90A26D6RGX4 464 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 REG1AP05451 166 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 ERHP84090 104 aaKnown RBP17.6■□□□□ 0.41
LINC01116-201ENST00000295549 SPINK9Q5DT21 86 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 NDUFA11Q86Y39 141 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 OR10C1Q96KK4 312 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 MS4A10Q96PG2 267 aa17.6■□□□□ 0.41
LINC01116-201ENST00000295549 TET2Q6N021 2002 aaPredicted RBP17.6■□□□□ 0.41
LINC01116-201ENST00000295549 TRGV3P03979 118 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms