RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TRAV9-1A0A075B6T8 112 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 M0R296 226 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 DUX1O43812 170 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 CCL3P10147 92 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 SRD5A2P31213 254 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 GPR183P32249 361 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 RHOGP84095 191 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 RNPS1Q15287 305 aaKnown RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 BHLHA15Q7RTS1 189 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 SPACA3Q8IXA5 215 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 CPT1CQ8TCG5 803 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 TNFRSF14Q92956 283 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 MGST2Q99735 147 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 TPRP12270 2363 aaKnown RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 IGLV2-14P01704 120 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 NTF4P34130 210 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 BMI1P35226 326 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 EDDM3AQ14507 147 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 EFNB3Q15768 340 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 CEACAM21Q3KPI0 293 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 FAM71F2Q6NXP2 309 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 LHFPL4Q7Z7J7 247 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 SCCPDHQ8NBX0 429 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 OR4S2Q8NH73 311 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 GALMQ96C23 342 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 FGF23Q9GZV9 251 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 RP1L1Q8IWN7 2480 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-201ENST00000295522 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 CT55Q8WUE5 264 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 ZNF835Q9Y2P0 537 aa8.48□□□□□ -1.05
CLDN1-201ENST00000295522 H0YJW9 148 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 OR2H2O95918 312 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 PTGDSP41222 190 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 AESQ08117 197 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.47□□□□□ -1.05
CLDN1-201ENST00000295522 PERPQ96FX8 193 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 ISLRO14498 428 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 CDIPTO14735 213 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 SCRG1O75711 98 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 ARF6P62330 175 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 ARG2P78540 354 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 VWA1Q6PCB0 445 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 EML6Q6ZMW3 1958 aa8.47□□□□□ -1.05
CLDN1-201ENST00000295522 MRPL33O75394 65 aaKnown RBP8.46□□□□□ -1.05
CLDN1-201ENST00000295522 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.05
CLDN1-201ENST00000295522 ERVK-16P61578 105 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 PHF7Q9BWX1 381 aaPredicted RBP8.46□□□□□ -1.05
CLDN1-201ENST00000295522 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 PRRG4Q9BZD6 226 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 AKIRIN1Q9H9L7 192 aaPredicted RBP8.46□□□□□ -1.05
CLDN1-201ENST00000295522 DUSP13Q9UII6 198 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 ZNF391Q9UJN7 358 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A10PA6NDY2 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A18PA6NE21 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A16PA6NEW6 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A20PA6NIJ5 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A8PA6NJQ4 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A7PA6NKC0 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A22PA8MWA6 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A12PA8MX19 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A5PA8MXJ8 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A23PA8MXZ1 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 C5orf67F2Z3F1 127 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A15PP0C7V4 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A13PP0C7W8 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A14PP0C7W9 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FAM90A24PP0C7X0 464 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 IGFBP2P18065 325 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 FOXL2NBQ6ZUU3 175 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 TPPP3Q9BW30 176 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 ST20Q9HBF5 79 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 SH2D2AQ9NP31 389 aa8.46□□□□□ -1.05
CLDN1-201ENST00000295522 F11RQ9Y624 299 aaKnown RBP8.46□□□□□ -1.05
CLDN1-201ENST00000295522 TRGV10A0A0A0MS01 117 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 LILRA5A6NI73 299 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 CD5LO43866 347 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 NBEAP1P0C6P0 100 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 OR9G9P0C7N8 305 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 PLP2Q04941 152 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 Q6ZS49 121 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 GNG12Q9UBI6 72 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 LSM4Q9Y4Z0 139 aaKnown RBP8.46□□□□□ -1.06
CLDN1-201ENST00000295522 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
CLDN1-201ENST00000295522 LOC102723996A0A087X1L8 192 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 A0A1W2PPC4 97 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 HIGD1CA8MV81 97 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
CLDN1-201ENST00000295522 AZU1P20160 251 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms