RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 SMIM8Q96KF7 97 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 MOB4Q9Y3A3 225 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 IGSF23A1L1A6 192 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 FAM24AA6NFZ4 105 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 UBE2KP61086 200 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 VAMP2P63027 116 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 EWSR1Q01844 656 aaKnown RBP eCLIP12.23□□□□□ -0.45
NCK1-201ENST00000288986 MMDQ15546 238 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 Q6ZSV7 163 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 Q8N6K4 173 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
NCK1-201ENST00000288986 ZNF471Q9BX82 626 aaPredicted RBP12.23□□□□□ -0.45
NCK1-201ENST00000288986 TET2Q6N021 2002 aaPredicted RBP12.22□□□□□ -0.45
NCK1-201ENST00000288986 SRRM4A7MD48 611 aaKnown RBP12.22□□□□□ -0.45
NCK1-201ENST00000288986 M0QZK8 103 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 MED6O75586 246 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
NCK1-201ENST00000288986 OR4A47Q6IF82 309 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
NCK1-201ENST00000288986 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 PHYHIPLQ96FC7 376 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 BSCL2Q96G97 398 aaPredicted RBP12.22□□□□□ -0.45
NCK1-201ENST00000288986 AIFM2Q9BRQ8 373 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 RBKSQ9H477 322 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 FBXL17Q9UF56 701 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
NCK1-201ENST00000288986 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.45
NCK1-201ENST00000288986 SPDEFO95238 335 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 CNTFRP26992 372 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 MDFIQ99750 246 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
NCK1-201ENST00000288986 PRSS22Q9GZN4 317 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 BET1LQ9NYM9 111 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.45
NCK1-201ENST00000288986 TRAV3A0A0B4J244 114 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 TSPAN9O75954 239 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 AMY1AP04745 511 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 CAV2P51636 162 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 RPL23AP62750 156 aaKnown RBP12.21□□□□□ -0.46
NCK1-201ENST00000288986 NHLH2Q02577 135 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 BAXQ07812 192 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.46
NCK1-201ENST00000288986 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 OR4F5Q8NH21 305 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 ZC4H2Q9NQZ6 224 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.46
NCK1-201ENST00000288986 FOXA2Q9Y261 457 aaPredicted RBP12.21□□□□□ -0.46
NCK1-201ENST00000288986 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 NBR2O15453 112 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 FGF16O43320 207 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 FOXL1Q12952 345 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 Q6ZS46 218 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 Q8N9W7 124 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 RNF5Q99942 180 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 KIAA1456Q9P272 454 aa12.2□□□□□ -0.46
NCK1-201ENST00000288986 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 TMEM89A2RUT3 159 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 UPK2O00526 184 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 SHOXO15266 292 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 NDUFA7O95182 113 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 LY86O95711 162 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
NCK1-201ENST00000288986 TPT1P13693 172 aaKnown RBP12.19□□□□□ -0.46
NCK1-201ENST00000288986 MDKP21741 143 aaPredicted RBP12.19□□□□□ -0.46
NCK1-201ENST00000288986 SPCS3P61009 180 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 KRTAP21-3Q3LHN1 58 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 BAP18Q8IXM2 172 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 STPG2Q8N412 459 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 LINC01006Q8NI28 216 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 HARBI1Q96MB7 349 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 WFDC1Q9HC57 220 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 SIGLEC9Q9Y336 463 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 JTBO76095 146 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 IAPPP10997 89 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 OR2B8PP59922 312 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 PLGLAQ15195 96 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 RPL7L1Q6DKI1 246 aaKnown RBP12.19□□□□□ -0.46
NCK1-201ENST00000288986 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 UBAC2Q8NBM4 344 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 NPBQ8NG41 125 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 CIB3Q96Q77 187 aaPredicted RBP12.19□□□□□ -0.46
NCK1-201ENST00000288986 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
NCK1-201ENST00000288986 FGF2P09038 288 aa12.18□□□□□ -0.46
NCK1-201ENST00000288986 HTR2BP41595 481 aa12.18□□□□□ -0.46
NCK1-201ENST00000288986 LGALS7P47929 136 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms