RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 GAMTQ14353 236 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 FAM162BQ5T6X4 162 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 FAM53AQ6NSI3 398 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-201ENST00000287936 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 PERPQ96FX8 193 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 TIMD4Q96H15 378 aa8.3□□□□□ -1.08
HMGCR-201ENST00000287936 TNRC6AQ8NDV7 1962 aaKnown RBP8.3□□□□□ -1.08
HMGCR-201ENST00000287936 SVILO95425 2214 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 IER3P46695 156 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 EFNB3Q15768 340 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 ZNF705AQ6ZN79 300 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-201ENST00000287936 OR4A5Q8NH83 315 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 TRBV23-1A0A0A0MS06 115 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 CNIH1O95406 144 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 LINC00869P0C866 280 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 DEFA4P12838 97 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 VDAC2P45880 294 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-201ENST00000287936 REG1BP48304 166 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 ZNF474Q6S9Z5 364 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-201ENST00000287936 PAXXQ9BUH6 204 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 SLC31A2O15432 143 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 TOMM20LQ6UXN7 152 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 Q6ZS92 163 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 PDPNQ86YL7 162 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 OR9G1Q8NH87 305 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 BET1LQ9NYM9 111 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
HMGCR-201ENST00000287936 C1QTNF9P0C862 333 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 SELLP14151 372 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 FOXL1Q12952 345 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 HLA-DRB5Q30154 266 aa8.29□□□□□ -1.08
HMGCR-201ENST00000287936 K7EQM0 130 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 CGAP01215 116 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 P0C879 139 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 CRYBB3P26998 211 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 CHRNB4P30926 498 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 S100A7P31151 101 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-201ENST00000287936 RPEQ96AT9 228 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 GAFA1Q96PS6 74 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-201ENST00000287936 TNXAQ16473 311 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 IGFL3Q6UXB1 125 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 MIR17HGQ75NE6 70 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 NUP37Q8NFH4 326 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
HMGCR-201ENST00000287936 SAA1P0DJI8 122 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-201ENST00000287936 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 OR5AU1Q8NGC0 362 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 MRPL20Q9BYC9 149 aaKnown RBP8.28□□□□□ -1.08
HMGCR-201ENST00000287936 ARL2-SNX15V9GYD0 113 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 TRANK1O15050 2925 aa8.28□□□□□ -1.08
HMGCR-201ENST00000287936 PMS2P5A8MQ11 134 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 OR10J4P0C629 311 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 LGALS7P47929 136 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 CENPWQ5EE01 88 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 PRR27Q6MZM9 219 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 ZNF788Q6ZQV5 615 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.08
HMGCR-201ENST00000287936 IGLV3-9A0A075B6K5 115 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 C9JCJ5 164 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 SPINK4O60575 86 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 TMEM183BQ1AE95 376 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 TEX38Q6PEX7 206 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 OR8I2Q8N0Y5 310 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
HMGCR-201ENST00000287936 C5orf30Q96GV9 206 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
HMGCR-201ENST00000287936 VAMP8Q9BV40 100 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 TMEM106BQ9NUM4 274 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 CORTO00230 105 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 ORM2P19652 201 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
HMGCR-201ENST00000287936 HOXA4Q00056 320 aaPredicted RBP8.27□□□□□ -1.09
HMGCR-201ENST00000287936 IBA57Q5T440 356 aaKnown RBP8.27□□□□□ -1.09
HMGCR-201ENST00000287936 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 TCL1AP56279 114 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 CD69Q07108 199 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 OR1B1Q8NGR6 318 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 Q8TCH9 128 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 PARD6AQ9NPB6 346 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 NAGKQ9UJ70 344 aa8.27□□□□□ -1.09
HMGCR-201ENST00000287936 MED13Q9UHV7 2174 aa8.26□□□□□ -1.09
HMGCR-201ENST00000287936 HLA-DQA1P01909 254 aa8.26□□□□□ -1.09
HMGCR-201ENST00000287936 AMBPP02760 352 aa8.26□□□□□ -1.09
HMGCR-201ENST00000287936 TYMSP04818 313 aa8.26□□□□□ -1.09
HMGCR-201ENST00000287936 LOXL3P58215 753 aa8.26□□□□□ -1.09
HMGCR-201ENST00000287936 C17orf58Q2M2W7 97 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms