RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 HERVK_113P61574 105 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 ARF6P62330 175 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 OR51G1Q8NGK1 321 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 CLDND2Q8NHS1 167 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 LSM10Q969L4 123 aaKnown RBP10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 RRHO14718 337 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 PRSS2P07478 247 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 RPL23P62829 140 aaKnown RBP10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM177Q53S58 311 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 ASCL3Q9NQ33 180 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 CDC42EP3Q9UKI2 254 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 CHD7Q9P2D1 2997 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 TRAV8-6A0A0B4J262 113 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 C7orf71A4D174 169 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 TMPRSS2O15393 492 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 GZMHP20718 246 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 CTSSP25774 331 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 OR5P3Q8WZ94 311 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 SPSB4Q96A44 273 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 HARBI1Q96MB7 349 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 PRRG2O14669 202 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 OR4A8P0C604 315 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 MPZP25189 248 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 REG1BP48304 166 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 CENPWQ5EE01 88 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 KLF14Q8TD94 323 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 SNRNP40Q96DI7 357 aaKnown RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 C1orf147Q96MC9 270 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF71Q9NQZ8 489 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 C9JQL5 133 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 MPDU1O75352 247 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 IGHV3-48P01763 117 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 CD5P06127 495 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 TNFAIP6P98066 277 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 ICAM4Q14773 271 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 PERPQ96FX8 193 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 C1QTNF5Q9BXJ0 243 aa10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 AMMECR1Q9Y4X0 333 aaPredicted RBP10.6□□□□□ -0.71
SLC6A1-201ENST00000287766 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 VENTXO95231 258 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 CLDN14O95500 239 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 COX7A1P24310 79 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 PRDX2P32119 198 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ACSF3Q4G176 576 aaPredicted RBP10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 FAM214BQ7L5A3 538 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 GGNQ86UU5 652 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF664Q8N3J9 261 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 RPEQ96AT9 228 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 NDUFB3O43676 98 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ACP1P24666 158 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 NDUFA2O43678 99 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 SFTPCP11686 197 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ATP5G3P48201 142 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 KLK15Q9H2R5 256 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 LILRA1O75019 489 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 UCP1P25874 307 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 CCL8P80075 99 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 Q0VFX4 171 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 ZBTB34Q8NCN2 500 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 GAL3ST2Q9H3Q3 398 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 PRNDQ9UKY0 176 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 UNC80Q8N2C7 3258 aa10.59□□□□□ -0.71
SLC6A1-201ENST00000287766 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 C1QTNF9BB2RNN3 333 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 C1QTNF9P0C862 333 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 GPR6P46095 362 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 CLDN18P56856 261 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 THYN1Q9P016 225 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 EREGO14944 169 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 CRXO43186 299 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 HOXA4Q00056 320 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 TWIST1Q15672 202 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 C2orf83Q53S99 150 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 BHLHA15Q7RTS1 189 aaPredicted RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 C18orf12Q96KH6 178 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 TMEM238LA0A1B0GVL6 79 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A10PA6NDY2 464 aa10.58□□□□□ -0.72
SLC6A1-201ENST00000287766 FAM90A18PA6NE21 464 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms