RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 SLC25A40Q8TBP6 338 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 FAM103A1Q9BTL3 118 aaKnown RBP8.6□□□□□ -1.03
SKA1-201ENST00000285116 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 TBL2Q9Y4P3 447 aaKnown RBP8.6□□□□□ -1.03
SKA1-201ENST00000285116 RNF114Q9Y508 228 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 PPIAL4AQ9Y536 164 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 LY96Q9Y6Y9 160 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 A8MXE2 369 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 SNURFLB1AK76 121 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 BMP5P22003 454 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 HLA-DRB5Q30154 266 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 HES3Q5TGS1 186 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 FAM90A1Q86YD7 464 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 OR52L2PQ8NGH6 319 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 GTF3C1Q12789 2109 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 SPG11Q96JI7 2443 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 TRAV38-1A0A0B4J264 116 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 C15orf65H3BRN8 121 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 MT-ND6P03923 174 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 IER3P46695 156 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 THBS3P49746 956 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 RPL19P84098 196 aaKnown RBP8.6□□□□□ -1.03
SKA1-201ENST00000285116 ZNF816Q0VGE8 651 aaPredicted RBP8.6□□□□□ -1.03
SKA1-201ENST00000285116 ZNF738Q8NE65 137 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 NCOR1P1Q9H4R4 102 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 GNB4Q9HAV0 340 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 TRGV8A0A0C4DH27 118 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 REG1AP05451 166 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 IGHV1-2P23083 117 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 CD1BP29016 333 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 KIR2DS2P43631 304 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 AMTP48728 403 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 MORN2Q502X0 79 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 KCNS1Q96KK3 526 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 FER1L6-AS2Q96M78 137 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 SPRR3Q9UBC9 169 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 CLCF1Q9UBD9 225 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
SKA1-201ENST00000285116 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 SCO2A0A1W2PP80 73 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 FNDC10F2Z333 226 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 AQP7O14520 342 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 IGKV3-15P01624 115 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 CELA3BP08861 270 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 STAG3L2P0CL84 134 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 STAG3L3P0CL85 134 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 HNF1AP20823 631 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
SKA1-201ENST00000285116 RPEL1Q2QD12 228 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 KLF14Q8TD94 323 aaPredicted RBP8.59□□□□□ -1.03
SKA1-201ENST00000285116 ZDHHC16Q969W1 377 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 BET1LQ9NYM9 111 aa8.59□□□□□ -1.03
SKA1-201ENST00000285116 TRGV5A0A0B4J1U4 118 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 LINC00473A8K010 186 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 SLC17A3O00476 420 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 CXorf1O96002 111 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 PRRX1P54821 245 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 C3AR1Q16581 482 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 SMIM21Q3B7S5 101 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 COX19Q49B96 90 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 GCSAMLQ5JQS6 135 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 WDR73Q6P4I2 378 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 WDR82Q6UXN9 313 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 Q6ZT83 130 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 MMD2Q8IY49 270 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 C11orf52Q96A22 123 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 ALKBH7Q9BT30 221 aaPredicted RBP8.58□□□□□ -1.04
SKA1-201ENST00000285116 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
SKA1-201ENST00000285116 JPT1Q9UK76 154 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 C9JCJ5 164 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
SKA1-201ENST00000285116 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
SKA1-201ENST00000285116 ALKBH6Q3KRA9 238 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 Q6ZR03 302 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 SLC35D1Q9NTN3 355 aa8.58□□□□□ -1.04
SKA1-201ENST00000285116 LSM4Q9Y4Z0 139 aaKnown RBP8.58□□□□□ -1.04
SKA1-201ENST00000285116 DPRXA6NFQ7 191 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 SPINT2O43291 252 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 ARL14EPLP0DKL9 152 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 CFHR2P36980 270 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 EDDM3BP56851 147 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 AESQ08117 197 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
SKA1-201ENST00000285116 ZNF808Q8N4W9 903 aaPredicted RBP8.57□□□□□ -1.04
SKA1-201ENST00000285116 UBALD1Q8TB05 177 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 A0A1W2PN81 502 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 A0A1W2PS18 150 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 K7EN84 100 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 IGHG3P01860 377 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 GRPP07492 148 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 AREGP15514 252 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 TSPOP30536 169 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms