RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 COPEO14579 308 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 FFAR1O14842 300 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 LYPLA1O75608 230 aaPredicted RBP3.45□□□□□ -1.86
CD44-202ENST00000278385 PPP1R3DO95685 299 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 APOA2P02652 100 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 FGF6P10767 208 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 FOLR2P14207 255 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 ZBTB25P24278 435 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 P2RX1P51575 399 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 SLC18A1P54219 525 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 TAS2R46P59540 309 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 ZNF616Q08AN1 781 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 HERPUD1Q15011 391 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 GRK1Q15835 563 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 MESTQ5EB52 335 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 NUP37Q8NFH4 326 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 OR13A1Q8NGR1 328 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 CNBD2Q96M20 576 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 CCDC115Q96NT0 180 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 SPACA5Q96QH8 159 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 MRPL57Q9BQC6 102 aaKnown RBP3.45□□□□□ -1.86
CD44-202ENST00000278385 SFXN3Q9BWM7 321 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 EDA2RQ9HAV5 297 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 MMP26Q9NRE1 261 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 SSR3Q9UNL2 185 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 ZNF835Q9Y2P0 537 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 RNF11Q9Y3C5 154 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 SLC25A15Q9Y619 301 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 BAHCC1Q9P281 2608 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 SEC16AO15027 2179 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 PIKFYVEQ9Y2I7 2098 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 YLPM1P49750 1951 aaKnown RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 A0A087WW49 117 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 A0A1B0GUV1 79 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 IFITM10A6NMD0 228 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 H3BQF6 201 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 H7C1C5 153 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 SAP18O00422 153 aaKnown RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 ZNF207O43670 478 aaKnown RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 IGKV3-11P04433 115 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 CRYBA1P05813 215 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 RAB3AP20336 220 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 NCBP2P52298 156 aaKnown RBP eCLIP3.44□□□□□ -1.86
CD44-202ENST00000278385 ZNF138P52744 262 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 LCN6P62502 163 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 RPS28P62857 69 aaKnown RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 HLA-DRB3P79483 266 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 IGLV3-21P80748 117 aaPredicted RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 PLGLB1Q02325 96 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 EMX2Q04743 252 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 PAX8Q06710 450 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 IL15RAQ13261 267 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 JOSD1Q15040 202 aaPredicted RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 RGNQ15493 299 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OR8B8Q15620 311 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 RNF212Q495C1 297 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 CENPWQ5EE01 88 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 LCN8Q6JVE9 175 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 LINC00173Q6ZV60 143 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 ZFP62Q8NB50 900 aaPredicted RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 AQP11Q8NBQ7 271 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OR8B12Q8NGG6 310 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OR2G3Q8NGZ4 309 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OR8S1Q8NH09 359 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 ZNF675Q8TD23 568 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 DCAKDQ8WVC6 231 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 ITLN2Q8WWU7 325 aaPredicted RBP3.44□□□□□ -1.86
CD44-202ENST00000278385 ROPN1LQ96C74 230 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 FCRL1Q96LA6 429 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 OR8D2Q9GZM6 311 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 PCTPQ9UKL6 214 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 WASHC3Q9Y3C0 194 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 SPTBP11277 2137 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 ITPR1Q14643 2758 aa3.44□□□□□ -1.86
CD44-202ENST00000278385 IGHV4-30-2A0A087WSY4 118 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 SMIM26A0A096LP01 95 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 A0A096LPI6 279 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 TRAV8-3A0A0A6YYJ7 113 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 TRAV26-2A0A0B4J265 109 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 IGHV1-69DA0A0B4J2H0 117 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 A0A1B0GX51 115 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 A8MT66 165 aa3.43□□□□□ -1.86
CD44-202ENST00000278385 PRAC2D3DTV9 90 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms