RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 COX5BP10606 129 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 GATA2P23769 480 aaPredicted RBP15.22■□□□□ 0.03
COL5A3-201ENST00000264828 ATP5J2P56134 94 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 TTC9CQ8N5M4 171 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 TMEM101Q96IK0 257 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 RTBDNQ9BSG5 229 aaPredicted RBP15.22■□□□□ 0.03
COL5A3-201ENST00000264828 IGKV1D-43A0A0B4J1Z2 117 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 TCF23Q7RTU1 214 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 BEND2Q8NDZ0 799 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 ALKBH7Q9BT30 221 aaPredicted RBP15.21■□□□□ 0.03
COL5A3-201ENST00000264828 RNASE4P34096 147 aaKnown RBP15.21■□□□□ 0.03
COL5A3-201ENST00000264828 CA7P43166 264 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 ACP7Q6ZNF0 438 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 DNASE2BQ8WZ79 361 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 CCL19Q99731 98 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 TMEM250H0YL14 139 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 ATRAIDQ6UW56 229 aa15.21■□□□□ 0.03
COL5A3-201ENST00000264828 CARHSP1Q9Y2V2 147 aaKnown RBP15.21■□□□□ 0.03
COL5A3-201ENST00000264828 SYNGR3O43761 229 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 JKAMPQ9P055 326 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 C12orf77C9JDV5 145 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 CTHRC1Q96CG8 243 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 TMEM74BQ9NUR3 256 aa15.21■□□□□ 0.02
COL5A3-201ENST00000264828 PSME4Q14997 1843 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 RPP21Q9H633 154 aaKnown RBP15.2■□□□□ 0.02
COL5A3-201ENST00000264828 SPCS1Q9Y6A9 102 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 IGKV3D-20A0A0C4DH25 116 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 NPIPB4C9JG80 1138 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 FAM169BQ8N8A8 192 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 RFPL3SP0C7P2 107 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 NIT1Q86X76 327 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 CELA3AP09093 270 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 GPX4P36969 197 aaPredicted RBP15.2■□□□□ 0.02
COL5A3-201ENST00000264828 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
COL5A3-201ENST00000264828 GREB1LQ9C091 1923 aaPredicted RBP15.2■□□□□ 0.02
COL5A3-201ENST00000264828 IGKV1D-33P01593 117 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 IGKV1-33P01594 117 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 SMAD7O15105 426 aaKnown RBP15.19■□□□□ 0.02
COL5A3-201ENST00000264828 SFTA2Q6UW10 78 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 RAB9AP51151 201 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 PAPPA-AS1Q5QFB9 102 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 PRB3Q04118 309 aaPredicted RBP15.19■□□□□ 0.02
COL5A3-201ENST00000264828 GDF15Q99988 308 aa15.19■□□□□ 0.02
COL5A3-201ENST00000264828 A0A1B0GV72 72 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 NUDT10Q8NFP7 164 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 OR13A1Q8NGR1 328 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 FMC1Q96HJ9 113 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 AICDAQ9GZX7 198 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 FBXL7Q9UJT9 491 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 PF4P02776 101 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 HOXB1P14653 301 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 GNG5P63218 68 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 ZNF324BQ6AW86 544 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 DUX3Q96PT4 197 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 C2orf88Q9BSF0 95 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 MTURNQ8N3F0 131 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 OR5AN1Q8NGI8 311 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 LOC105371267A0A1B0GV96 52 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 LOC390937A0A1W2PQ73 354 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 TBX6O95947 436 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 GPR183P32249 361 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 SRSF3P84103 164 aaKnown RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 HOXA5P20719 270 aa15.18■□□□□ 0.02
COL5A3-201ENST00000264828 RNASE7Q9H1E1 156 aaKnown RBP15.18■□□□□ 0.02
COL5A3-201ENST00000264828 TRAV14DV4A0A0A6YYC5 116 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 A0A1B0GUT8 65 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 ADMP35318 185 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 LEPP41159 167 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 PDLIM4P50479 330 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 OR52E5Q8NH55 327 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 SSBP4Q9BWG4 385 aaPredicted RBP15.17■□□□□ 0.02
COL5A3-201ENST00000264828 FAM71F2Q6NXP2 309 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 FAM216BQ8N7L0 139 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 BRCA1P38398 1863 aaKnown RBP15.17■□□□□ 0.02
COL5A3-201ENST00000264828 Q5PR19 223 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 LRTM2Q8N967 370 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 RNASEH2CQ8TDP1 164 aaKnown RBP15.17■□□□□ 0.02
COL5A3-201ENST00000264828 NEUROG1Q92886 237 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 Q9H3A6 140 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 CLEC19AQ6UXS0 136 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 SIGLEC12Q96PQ1 595 aa15.17■□□□□ 0.02
COL5A3-201ENST00000264828 GFRA3O60609 400 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 IGHV4-39P01824 125 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 OR5A1Q8NGJ0 315 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 DERL1Q9BUN8 251 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 TRAV12-3A0A0B4J271 114 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 H3BUT2 72 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 PRB4P10163 310 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-201ENST00000264828 TM2D1Q9BX74 207 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 MRPL20Q9BYC9 149 aaKnown RBP15.16■□□□□ 0.02
COL5A3-201ENST00000264828 A0A0G2JK05 382 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 PRR19A6NJB7 356 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 LINC00614P0C842 121 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 GFI1BQ5VTD9 330 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 SDF2L1Q9HCN8 221 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 SEMA5BQ9P283 1151 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms