RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MPZP25189 248 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 ATP5G2Q06055 141 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 TWIST1Q15672 202 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 EBLN2Q6P2I7 272 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 OR8A1Q8NGG7 326 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 YPEL1O60688 119 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 HLA-DQA1P01909 254 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 TFF3Q07654 80 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 YPEL2Q96QA6 119 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
CDH3-201ENST00000264012 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
CDH3-201ENST00000264012 IGFBP2P18065 325 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 FAM106AQ4KMX7 169 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 ATRAIDQ6UW56 229 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 LINC00305Q7Z4B0 112 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
CDH3-201ENST00000264012 SAA2-SAA4A0A096LPE2 208 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 E9PLN8 166 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 SAA2P0DJI9 122 aaPredicted RBP11.72□□□□□ -0.53
CDH3-201ENST00000264012 VKORC1Q9BQB6 163 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 CLDN16Q9Y5I7 305 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 IL18BPO95998 194 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1D-33P01593 117 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1-33P01594 117 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 PSG9Q00887 426 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 MDS2Q8NDY4 140 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 PAM16Q9Y3D7 125 aa11.72□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1-27A0A075B6S5 117 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 C5orf63A6NC05 138 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 MORN2Q502X0 79 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 H0YIZ8 118 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 LDLRAD4O15165 306 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 SCGB1C2P0DMR2 95 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 TIMP3P35625 211 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 OR1P1Q8NH06 330 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 NPPCP23582 126 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 RAB9AP51151 201 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.53
CDH3-201ENST00000264012 DIRC3C9JPN6 131 aa11.71□□□□□ -0.54
CDH3-201ENST00000264012 MAS1LP35410 378 aa11.71□□□□□ -0.54
CDH3-201ENST00000264012 PGLYRP4Q96LB8 373 aa11.71□□□□□ -0.54
CDH3-201ENST00000264012 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.54
CDH3-201ENST00000264012 TUBA4BQ9H853 241 aa11.71□□□□□ -0.54
CDH3-201ENST00000264012 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 B3GALT5-AS1P59052 145 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 PTPRDP23468 1912 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 CDKN1AP38936 164 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 SRSF12Q8WXF0 261 aaKnown RBP11.7□□□□□ -0.54
CDH3-201ENST00000264012 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
CDH3-201ENST00000264012 CA7P43166 264 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 ZNF324BQ6AW86 544 aaPredicted RBP11.7□□□□□ -0.54
CDH3-201ENST00000264012 A1L4Q6 167 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 SAA1P0DJI8 122 aaPredicted RBP11.7□□□□□ -0.54
CDH3-201ENST00000264012 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 FAM166AQ6J272 317 aa11.7□□□□□ -0.54
CDH3-201ENST00000264012 TP53BP1Q12888 1972 aaPredicted RBP11.69□□□□□ -0.54
CDH3-201ENST00000264012 RAMP3O60896 148 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 IGHV1-46P01743 117 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 RELQ04864 619 aaPredicted RBP11.69□□□□□ -0.54
CDH3-201ENST00000264012 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 S4R3C0 116 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 CKS2P33552 79 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 TSC2P49815 1807 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 CGAP01215 116 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 CACNG8Q8WXS5 425 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 HERVK_113P61574 105 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 FHL1Q13642 323 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 FAM168AQ92567 244 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 NLRC5Q86WI3 1866 aa11.69□□□□□ -0.54
CDH3-201ENST00000264012 VENTXO95231 258 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 ID3Q02535 119 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 GLRX5Q86SX6 157 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 LHFPL1Q86WI0 220 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 RELBQ01201 579 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
CDH3-201ENST00000264012 OR4B1Q8NGF8 309 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms