RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 THAP6Q8TBB0 222 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 SSMEM1Q8WWF3 244 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 COMMD5Q9GZQ3 224 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 ESM1Q9NQ30 184 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 C1RLQ9NZP8 487 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 FBXO7Q9Y3I1 522 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 MSGN1A6NI15 193 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 C1QBP02746 253 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 REG1AP05451 166 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 RPL27AP46776 148 aaKnown RBP7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 COMPP49747 757 aaPredicted RBP7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 SPCS3P61009 180 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 FXYD3Q14802 87 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 ZFP69Q49AA0 526 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 PRSS54Q6PEW0 395 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 OR8H1Q8NGG4 311 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 OR1L8Q8NGR8 309 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 DTD1Q8TEA8 209 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 DCUN1D4Q92564 292 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 NDUFA4L2Q9NRX3 87 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 CDC42EP3Q9UKI2 254 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 VPREB3Q9UKI3 123 aa7.71□□□□□ -1.18
SNRNP40-201ENST00000263694 BTBD17A6NE02 478 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 FAM24AA6NFZ4 105 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 DNAJC9-AS1A6NH13 148 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 ACTL6BO94805 426 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 RLN2P04090 185 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 HNRNPCP07910 306 aaKnown RBP eCLIP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 FGF2P09038 288 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 AREGP15514 252 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 VDAC2P45880 294 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 HOXA1P49639 335 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 PRCDQ00LT1 54 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 WT1-ASQ06250 92 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 RBMS3Q6XE24 437 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 ZNF546Q86UE3 836 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 NOXA1Q86UR1 476 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 OR52E5Q8NH55 327 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 OR5R1Q8NH85 324 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 ABHD5Q8WTS1 349 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 SRSF12Q8WXF0 261 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 BSCL2Q96G97 398 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 FKBP11Q9NYL4 201 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 PSENENQ9NZ42 101 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 LINC00527Q9UJ94 153 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 PITPNC1Q9UKF7 332 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 ZNF257Q9Y2Q1 563 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 NF1P21359 2839 aa7.7□□□□□ -1.18
SNRNP40-201ENST00000263694 TEX22C9J3V5 150 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 L7N2F9 121 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 ARPC5O15511 151 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 HLA-DRB1P01911 266 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 OR13C7P0DN81 318 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 SLC25A4P12235 298 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 LYL1P12980 280 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 MAS1LP35410 378 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 EIF2B2P49770 351 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 AP2S1P53680 142 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 VAMP2P63027 116 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 SRSF2Q01130 221 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 FGL1Q08830 312 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM267Q0VDI3 215 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 SPANXN5Q5MJ07 72 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 ZNF562Q6V9R5 426 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 OR5B3Q8NH48 314 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 OR4C12Q96R67 309 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 PLEKHA3Q9HB20 300 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 PARP11Q9NR21 331 aa7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 PAIP2BQ9ULR5 123 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-201ENST00000263694 IGLC7A0M8Q6 106 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 IGSF23A1L1A6 192 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 E5RGE8 158 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 FGF16O43320 207 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 GPR137BO60478 399 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 MED6O75586 246 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 CXCL2P19875 107 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 CAV2P51636 162 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 NHLH2Q02577 135 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM95Q3KNT9 176 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 PDLIM3Q53GG5 364 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 ASPHD1Q5U4P2 390 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 LFNGQ8NES3 379 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM170AQ8WVE7 144 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 ARPC1AQ92747 370 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 SMIM8Q96KF7 97 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 RAB40CQ96S21 281 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 ENY2Q9NPA8 101 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 WSB1Q9Y6I7 421 aa7.68□□□□□ -1.18
SNRNP40-201ENST00000263694 G3V318 75 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 ATP6V0E1O15342 81 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 CRLF1O75462 422 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms