RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 APCSP02743 223 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 PSG1P11464 419 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 AREGP15514 252 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 GABRA2P47869 451 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 RAB30Q15771 203 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 PRAMEF5Q5TYX0 476 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 PRAMEF6Q5VXH4 476 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 PRR27Q6MZM9 219 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 PQLC2Q6ZP29 291 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 IGHV3-43A0A0B4J1X8 118 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 IGHV3-43DP0DP04 118 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 OR1C1Q15619 314 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 OR4F17Q8NGA8 305 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 OR4P4Q8NGL7 312 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
XRCC1-201ENST00000262887 CGAP01215 116 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 GRPP07492 148 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 APOBEC3AP31941 199 aaPredicted RBP12.4□□□□□ -0.42
XRCC1-201ENST00000262887 TMPRSS3P57727 454 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 SELENOVP59797 346 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 MRPL49Q13405 166 aaKnown RBP12.4□□□□□ -0.42
XRCC1-201ENST00000262887 MUC15Q8N387 334 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 CLUHP3Q96NS8 147 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 HES4Q9HCC6 221 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.42
XRCC1-201ENST00000262887 PSG11Q9UQ72 335 aa12.4□□□□□ -0.42
XRCC1-201ENST00000262887 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
XRCC1-201ENST00000262887 DEFB108AA8MXU0 73 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 PRSS46E5RG02 174 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 COL8A2P25067 703 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 TIGITQ495A1 244 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 NPVFQ9HCQ7 196 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 CRYBB3P26998 211 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 SSTR5P35346 364 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 ABHD12Q8N2K0 398 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 STPG3Q8N7X2 389 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 GPR179Q6PRD1 2367 aa12.39□□□□□ -0.43
XRCC1-201ENST00000262887 FCGR3BO75015 233 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 CCL4P13236 92 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 SLC35E4Q6ICL7 350 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 C18orf32Q8TCD1 76 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 GFRA3O60609 400 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 IGLL1P15814 213 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 USF1P22415 310 aaPredicted RBP12.38□□□□□ -0.43
XRCC1-201ENST00000262887 OTX2P32243 289 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 CYB561P49447 251 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 Q0VFX4 171 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 Q56UQ5 140 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 FSCN3Q9NQT6 498 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 LSM4Q9Y4Z0 139 aaKnown RBP12.38□□□□□ -0.43
XRCC1-201ENST00000262887 SMIM27A0A1W2PRY6 76 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 FAM181BA6NEQ2 426 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 ISLRO14498 428 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 RIPPLY3P57055 190 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 TEPPQ6URK8 271 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
XRCC1-201ENST00000262887 H0YJW9 148 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 HSBP1O75506 76 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 LINC00869P0C866 280 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
XRCC1-201ENST00000262887 FOXF2Q12947 444 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 TNXAQ16473 311 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 COQ2Q96H96 371 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 MEGF9Q9H1U4 602 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 SERTAD4Q9NUC0 356 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 CELA3AP09093 270 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 ARF6P62330 175 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 IBA57Q5T440 356 aaKnown RBP12.37□□□□□ -0.43
XRCC1-201ENST00000262887 ERASQ7Z444 233 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
XRCC1-201ENST00000262887 ZNF331Q9NQX6 463 aaPredicted RBP12.37□□□□□ -0.43
XRCC1-201ENST00000262887 BOKQ9UMX3 212 aaPredicted RBP12.37□□□□□ -0.43
XRCC1-201ENST00000262887 IZUMO1RA6ND01 250 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 M0R2Z0 102 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 WNT9BO14905 357 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 ACTL6BO94805 426 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 ARG2P78540 354 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 HOXA4Q00056 320 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-201ENST00000262887 RELBQ01201 579 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 SLAQ13239 276 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 PSG5Q15238 335 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 TBR1Q16650 682 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 LRRC10Q5BKY1 277 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 OR4A47Q6IF82 309 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 MDP1Q86V88 176 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 ARL2-SNX15V9GYD0 113 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 ZNF891A8MT65 544 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-201ENST00000262887 TFF1P04155 84 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 UBE2G1P62253 170 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 RAB31Q13636 194 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 LTC4SQ16873 150 aa12.36□□□□□ -0.43
XRCC1-201ENST00000262887 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-201ENST00000262887 OR8B3Q8NGG8 313 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms