RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 FOXG1P55316 489 aaPredicted RBP10.25□□□□□ -0.77
SPG11-201ENST00000261866 FGFBP3Q8TAT2 258 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 SIAH2O43255 324 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 IGFBP2P18065 325 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 RAB24Q969Q5 203 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 CBLN4Q9NTU7 201 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 SOD3P08294 240 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 CEP290O15078 2479 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 IGHV1-18A0A0C4DH31 117 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 LY6HO94772 140 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 TMEM187Q14656 261 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 SEC11BP0C7V7 166 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
SPG11-201ENST00000261866 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 TCRBV4S1A1TA0A5B7 111 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 NDUFA3O95167 84 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 COTL1Q14019 142 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 CYB5R2Q6BCY4 276 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 OR4D5Q8NGN0 318 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 PARLQ9H300 379 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 PATJQ8NI35 1801 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 TRAV8-6A0A0B4J262 113 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 ST6GALNAC6Q969X2 333 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 C8orf88P0DMB2 117 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 C1orf100Q5SVJ3 147 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 H1FOOQ8IZA3 346 aaPredicted RBP10.24□□□□□ -0.77
SPG11-201ENST00000261866 C1orf162Q8NEQ5 155 aaPredicted RBP10.24□□□□□ -0.77
SPG11-201ENST00000261866 WNT10AQ9GZT5 417 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 SEMA5BQ9P283 1151 aa10.24□□□□□ -0.77
SPG11-201ENST00000261866 ZNF146Q15072 292 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 A8MWL6 223 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 PLPPR1Q8TBJ4 325 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 PPP1R3EQ9H7J1 279 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 BRD3OSQ6XYD6 125 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 ARID2Q68CP9 1835 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 C7orf66A4D0T2 115 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 IGLV3-19P01714 112 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 IFT22Q9H7X7 185 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 CHD5Q8TDI0 1954 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 CD1AP06126 327 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 CD33P20138 364 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 Q5BKY6 102 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 MAP1LC3AQ9H492 121 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
SPG11-201ENST00000261866 CSRP1P21291 193 aaKnown RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 SELENOTP62341 195 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 A0A0G2JK05 382 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 KBTBD11-OT1A0A1B0GTJ5 212 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 GGCTO75223 188 aaKnown RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 FAM74A3Q4VXF1 159 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 ZNF646O15015 1829 aaPredicted RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 IL6RP08887 468 aaPredicted RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 SPSB4Q96A44 273 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 HEATR1Q9H583 2144 aaKnown RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 SAA2-SAA4A0A096LPE2 208 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 CGAP01215 116 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 SAA2P0DJI9 122 aaPredicted RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 A6NJY4 79 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 TYMSP04818 313 aa10.22□□□□□ -0.77
SPG11-201ENST00000261866 PRR30Q53SZ7 412 aaPredicted RBP10.22□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A10PA6NDY2 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A18PA6NE21 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A16PA6NEW6 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A20PA6NIJ5 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A8PA6NJQ4 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A7PA6NKC0 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A22PA8MWA6 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A12PA8MX19 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A5PA8MXJ8 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A23PA8MXZ1 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 TRGC2P03986 189 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A15PP0C7V4 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A13PP0C7W8 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A14PP0C7W9 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM90A24PP0C7X0 464 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 TSPOP30536 169 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 PRR31Q5SQ13 230 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 TRAV24A0A0B4J272 114 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 IGHV4-39P01824 125 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 H2BFSP57053 126 aa10.21□□□□□ -0.77
SPG11-201ENST00000261866 ZFP36L1Q07352 338 aaKnown RBP10.21□□□□□ -0.77
SPG11-201ENST00000261866 CDX1P47902 265 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms