RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PPP1R35Q8TAP8 253 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 RNASE8Q8TDE3 154 aaKnown RBP8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 ZDHHC16Q969W1 377 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 ARL2-SNX15V9GYD0 113 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 A0A1W2PS18 150 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 F2Z2F3 143 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 K7EN84 100 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 KLK10O43240 276 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 S1PR2O95136 353 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 DEFA4P12838 97 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 AMTP48728 403 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 THBS3P49746 956 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 EDDM3BP56851 147 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 TMPRSS3P57727 454 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 RPL30P62888 115 aaKnown RBP8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 ZNF816Q0VGE8 651 aaPredicted RBP8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 WDR82Q6UXN9 313 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 SSX8Q7RTT4 187 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 C11orf53Q8IXP5 236 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 PNKDQ8N490 385 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 EAF1Q96JC9 268 aaPredicted RBP8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 SLC35D1Q9NTN3 355 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 BET1LQ9NYM9 111 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 COX11Q9Y6N1 276 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 V9GYV3 84 aa8.93□□□□□ -0.98
CHRNA1-201ENST00000261007 DPRXA6NFQ7 191 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 FAM90A9PA6NNJ1 464 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 SLC17A3O00476 420 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 FABP6P51161 128 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 CX3CL1P78423 397 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 GCSAMLQ5JQS6 135 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 FAM57AQ8TBR7 257 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 NINJ1Q92982 152 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 FAM103A1Q9BTL3 118 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 RNF114Q9Y508 228 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 A0A1W2PN81 502 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 ZNF324O75467 553 aaPredicted RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 BMP5P22003 454 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 GCHFRP30047 84 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 CEACAM8P31997 349 aaPredicted RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 GLRXP35754 106 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 BRWD1-AS2P59051 145 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 RPL31P62899 125 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 PDLIM3Q53GG5 364 aaPredicted RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 Q6ZR03 302 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 OR2D2Q9H210 308 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 GSX1Q9H4S2 264 aaPredicted RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 YTHDF2Q9Y5A9 579 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 FAM215AQ9Y5M1 114 aa8.92□□□□□ -0.98
CHRNA1-201ENST00000261007 IGHV2-26A0A0B4J1V2 119 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 C17orf98A8MV24 154 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 PSPNO60542 156 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 IGHV3-13P01766 116 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 C3orf79P0CE67 100 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 TSPOP30536 169 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 ZNF83P51522 516 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 SELENOVP59797 346 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 RHOBP62745 196 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 TREML4Q6UXN2 200 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 ST6GALNAC3Q8NDV1 305 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 RAB9BQ9NP90 201 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 OSTCQ9NRP0 149 aa8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 MRPL27Q9P0M9 148 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-201ENST00000261007 VPS13AQ96RL7 3174 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 RRHO14718 337 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 RBMXL2O75526 392 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 HLA-DQA1P01909 254 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 ADH4P08319 380 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 SPINK2P20155 84 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 HNF1AP20823 631 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 RPS16P62249 146 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 PRAMEF6Q5VXH4 476 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 ZNF474Q6S9Z5 364 aaPredicted RBP8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 NIT1Q86X76 327 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 OR8I2Q8N0Y5 310 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 OR52E5Q8NH55 327 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 LRRC29Q8WV35 223 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 BORCS7Q96B45 105 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 C5orf30Q96GV9 206 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 HSD17B10Q99714 261 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 GGTLC1Q9BX51 225 aa8.9□□□□□ -0.98
CHRNA1-201ENST00000261007 IGHV2-70DA0A0C4DH43 119 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 SRRM5B3KS81 715 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 C12orf77C9JDV5 145 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 M0R1B8 84 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 SPINT2O43291 252 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 AMY1AP04745 511 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 GABRA2P47869 451 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 STUMQ69YW2 141 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 ZNF826PQ6ZT77 177 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 MRGPRDQ8TDS7 321 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 MGST2Q99735 147 aa8.9□□□□□ -0.99
CHRNA1-201ENST00000261007 ALKBH7Q9BT30 221 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms