RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PLXNA4Q9HCM2 1894 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 KIAA1671Q9BY89 1806 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 TRAV4A0A0B4J268 109 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 PAGE4O60829 102 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 GYPAP02724 150 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 SCTP09683 121 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 WASP42768 502 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 LAMTOR4Q0VGL1 99 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 VGLL4Q14135 290 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 PIANPQ8IYJ0 282 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 OR10G8Q8NGN5 311 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 A0A1W2PRU2 124 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 C2orf70A6NJV1 201 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 LRRC30A6NM36 301 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 RBMXP38159 391 aaKnown RBP6.42□□□□□ -1.38
GPNMB-201ENST00000258733 EFNB2P52799 333 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 C1orf61Q13536 156 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 NOXRED1Q6NXP6 359 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 CLECL1Q8IZS7 167 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 OR1F12Q8NHA8 337 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 OTOSQ8NHW6 89 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM70Q9BUB7 260 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM59Q9BXS4 323 aa6.42□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF236Q9UL36 1845 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 DHRS3O75911 302 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 PTGDSP41222 190 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 CCL23P55773 120 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM50BP56557 158 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 CX3CL1P78423 397 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 PMVKQ15126 192 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 APRG1Q8IVJ8 170 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 C5orf66Q9H5L9 145 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 PROCRQ9UNN8 238 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 TP53TG1Q9Y2A0 90 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 MRPS17Q9Y2R5 130 aaKnown RBP6.41□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF718Q3SXZ3 478 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 RFLNAQ6ZTI6 216 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 RNF128Q8TEB7 428 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 OR2A5Q96R48 311 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 ULBP3Q9BZM4 244 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 C1RLQ9NZP8 487 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 SCN2AQ99250 2005 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 MGAMO43451 1857 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 RALGAPA2Q2PPJ7 1873 aa6.41□□□□□ -1.38
GPNMB-201ENST00000258733 MS4A18H0YCH9 400 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 ZFAND5O76080 213 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 H2BFMP0C1H6 154 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 SLC35E4Q6ICL7 350 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 Q6ZS92 163 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 OR13H1Q8NG92 308 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 PDCD1LG2Q9BQ51 273 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 OR2W1Q9Y3N9 320 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 NSG1A0A0A6YYJ2 146 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 C1orf226A1L170 272 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 SH2D7A6NKC9 451 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-201ENST00000258733 SNURFLB1AK76 121 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 LINC01620Q4KN68 170 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 PRSS41Q7RTY9 318 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 APOBEC4Q8WW27 367 aaKnown RBP6.4□□□□□ -1.38
GPNMB-201ENST00000258733 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM230Q96A57 120 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 MCHR1Q99705 422 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 BPIFA1Q9NP55 256 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 RABAC1Q9UI14 185 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 KLK5Q9Y337 293 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-201ENST00000258733 MPC1Q9Y5U8 109 aa6.4□□□□□ -1.38
GPNMB-201ENST00000258733 COL4A5P29400 1685 aa6.4□□□□□ -1.39
GPNMB-201ENST00000258733 SCN10AQ9Y5Y9 1956 aa6.4□□□□□ -1.39
GPNMB-201ENST00000258733 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF732B4DXR9 585 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 CTGFP29279 349 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 CSN1S1P47710 185 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 FBXL22Q6P050 247 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 PARM1Q6UWI2 310 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 GOLT1AQ6ZVE7 132 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 HSD11B1LQ7Z5J1 315 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 TEX45Q8NA69 505 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 PBOV1Q9GZY1 135 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 PLXNB3Q9ULL4 1909 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 BPTFQ12830 3046 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 TRBV9A0A0B4J1U6 114 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ZC3H12DA2A288 527 aaKnown RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 FRG2CA6NGY1 282 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 LDB3O75112 727 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF688P0C7X2 276 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 CECR9P0C854 216 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 SUPT4H1P63272 117 aaKnown RBP6.39□□□□□ -1.39
GPNMB-201ENST00000258733 HSPB3Q12988 150 aa6.39□□□□□ -1.39
GPNMB-201ENST00000258733 HLA-DQA1Q5Y7H0 255 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms