RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ZNF436Q9C0F3 470 aaPredicted RBP7.68□□□□□ -1.18
VPS50-201ENST00000251739 VCX3BQ9H321 246 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 RAB26Q9ULW5 256 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 HECTD4Q9Y4D8 3996 aa7.68□□□□□ -1.18
VPS50-201ENST00000251739 A0A0A6YYH2 397 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 TRAV3A0A0B4J244 114 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 A6NJ64 397 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 UPK2O00526 184 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 TNFSF12O43508 249 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 CLEC3BP05452 202 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 PTBP1P26599 531 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS50-201ENST00000251739 PSMB9P28065 219 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 FCGR2CP31995 323 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 GPR183P32249 361 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 GDPD1Q8N9F7 314 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 OR5H6Q8NGV6 325 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 TMEM190Q8WZ59 177 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 FCGR1BQ92637 280 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 VCX3AQ9NNX9 186 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 MRPL27Q9P0M9 148 aaKnown RBP7.67□□□□□ -1.18
VPS50-201ENST00000251739 ETV7Q9Y603 341 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 VPS13DQ5THJ4 4388 aa7.67□□□□□ -1.18
VPS50-201ENST00000251739 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
VPS50-201ENST00000251739 ZNF320A2RRD8 509 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
VPS50-201ENST00000251739 HPRT1P00492 218 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 CLEC2LP0C7M8 214 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 NQO2P16083 231 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 SDC2P34741 201 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ARPC4P59998 168 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 EWSR1Q01844 656 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS50-201ENST00000251739 WT1-ASQ06250 92 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 TNFRSF9Q07011 255 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ANKRD55Q3KP44 614 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ODF3L2Q3SX64 289 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ZNF818PQ6ZRF7 136 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 VN1R17PQ8TDU5 208 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ZNF414Q96IQ9 312 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ATP6V0BQ99437 205 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 AIFM2Q9BRQ8 373 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 QTRT1Q9BXR0 403 aaKnown RBP7.66□□□□□ -1.18
VPS50-201ENST00000251739 C5orf66Q9H5L9 145 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 AUNIPQ9H7T9 357 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 PLEKHA2Q9HB19 425 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 TMEM140Q9NV12 185 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 COMMD9Q9P000 198 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 ANAPC10Q9UM13 185 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 TP53TG1Q9Y2A0 90 aa7.66□□□□□ -1.18
VPS50-201ENST00000251739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
VPS50-201ENST00000251739 TRAV18A0A075B6X5 111 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 SULT1C2O00338 296 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 TSPAN4O14817 238 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 TGOLN2O43493 480 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 S1PR2O95136 353 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 DEFA4P12838 97 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 MFAP2P55001 183 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 CATR1Q13166 79 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 THOC7Q6I9Y2 204 aaKnown RBP7.65□□□□□ -1.18
VPS50-201ENST00000251739 Q6ZWC4 215 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 CADM3Q8N126 398 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 OR10W1Q8NGF6 305 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 OR1L6Q8NGR2 347 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 GIMAP1Q8WWP7 306 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 SPAG8Q99932 426 aaPredicted RBP7.65□□□□□ -1.18
VPS50-201ENST00000251739 SLC5A7Q9GZV3 580 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 RNF167Q9H6Y7 350 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 HRASLSQ9HDD0 168 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 DAZ1Q9NQZ3 744 aaKnown RBP7.65□□□□□ -1.18
VPS50-201ENST00000251739 SSR3Q9UNL2 185 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 UFC1Q9Y3C8 167 aa7.65□□□□□ -1.18
VPS50-201ENST00000251739 IGHV3-35A0A0C4DH35 117 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 SERPINE2P07093 398 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 GNRHRP30968 328 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 ZNF585BQ52M93 769 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 PLET1Q6UQ28 207 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
VPS50-201ENST00000251739 OR2C3Q8N628 320 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 OR5AP2Q8NGF4 316 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 OR51H1Q8NH63 302 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 CD300LFQ8TDQ1 290 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 CHRDL1Q9BU40 450 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 COMMD5Q9GZQ3 224 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 THYN1Q9P016 225 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 HERC2O95714 4834 aa7.64□□□□□ -1.19
VPS50-201ENST00000251739 KIR2DL5BA0A0G2JN68 375 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 KIR2DL5BA0A0G2JPC4 375 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 A0A0J9YWU9 116 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 TEX50A0A1B0GTY4 177 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 K7EIM0 57 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 BMI1P35226 326 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 CBX5P45973 191 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 FXYD4P59646 89 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 MXD1Q05195 221 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 SPSB3Q6PJ21 355 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 RBPMS2Q6ZRY4 209 aaKnown RBP7.63□□□□□ -1.19
VPS50-201ENST00000251739 LYG2Q86SG7 212 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 TMEM17Q86X19 198 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 KIR2DL5AQ8N109 375 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms