RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MBD2Q9UBB5 411 aa10.3□□□□□ -0.76
LSM8-201ENST00000249299 TNFSF18Q9UNG2 199 aa10.3□□□□□ -0.76
LSM8-201ENST00000249299 LSM5Q9Y4Y9 91 aaKnown RBP10.3□□□□□ -0.76
LSM8-201ENST00000249299 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
LSM8-201ENST00000249299 ACANP16112 2415 aa10.3□□□□□ -0.76
LSM8-201ENST00000249299 ZNF469Q96JG9 3925 aaPredicted RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 CEBPZOSA8MTT3 80 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 CLDN34H7C241 214 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 WIPF1O43516 503 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 LORP23490 312 aaPredicted RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 PAX6P26367 422 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 ERHP84090 104 aaKnown RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 BAXQ07812 192 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
LSM8-201ENST00000249299 OR2C3Q8N628 320 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 OR11H4Q8NGC9 324 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 ZNF580Q9UK33 172 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 VPREB3Q9UKI3 123 aa10.29□□□□□ -0.76
LSM8-201ENST00000249299 HIVEP2P31629 2446 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 A0A0D9SG52 128 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 SSSCA1O60232 199 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 HTR2BP41595 481 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 PAX9P55771 341 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 RPL15P61313 204 aaKnown RBP10.28□□□□□ -0.76
LSM8-201ENST00000249299 CX3CL1P78423 397 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 PJVKQ0ZLH3 352 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 TNXAQ16473 311 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 OR1L6Q8NGR2 347 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 TPSG1Q9NRR2 321 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 OR5AC2Q9NZP5 309 aa10.28□□□□□ -0.76
LSM8-201ENST00000249299 SVEP1Q4LDE5 3571 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 FCN1O00602 326 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 KCNAB3O43448 404 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 CNIH1O95406 144 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 TMEM50AO95807 157 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 CA2P00918 260 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 SRD5A1P18405 259 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 SUB1P53999 127 aaKnown RBP eCLIP10.27□□□□□ -0.777e-7■■■■■ 39.1
LSM8-201ENST00000249299 FXYD3Q14802 87 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 BSXQ3C1V8 233 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 STPG2Q8N412 459 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 SRSF12Q8WXF0 261 aaKnown RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 ZNF48Q96MX3 618 aaPredicted RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 MFFQ9GZY8 342 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 HEYLQ9NQ87 328 aaPredicted RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 PSENENQ9NZ42 101 aa10.27□□□□□ -0.77
LSM8-201ENST00000249299 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 SOX21Q9Y651 276 aaPredicted RBP10.27□□□□□ -0.77
LSM8-201ENST00000249299 SETXQ7Z333 2677 aaKnown RBP10.26□□□□□ -0.77
LSM8-201ENST00000249299 IGHV7-81A0A0B4J1V7 117 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 TAAR5O14804 337 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 ARPC5O15511 151 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 IGHV4-59P01825 116 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 AMY1AP04745 511 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 RPL12P30050 165 aaKnown RBP10.26□□□□□ -0.77
LSM8-201ENST00000249299 HOXA1P49639 335 aaPredicted RBP10.26□□□□□ -0.77
LSM8-201ENST00000249299 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
LSM8-201ENST00000249299 CAV2P51636 162 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 SSBP2P81877 361 aaPredicted RBP10.26□□□□□ -0.77
LSM8-201ENST00000249299 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 C2orf83Q53S99 150 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 PVRIGQ6DKI7 326 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 TMEM14EPQ6UXP3 125 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 STX12Q86Y82 276 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 KCNRGQ8N5I3 272 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 C22orf15Q8WYQ4 148 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
LSM8-201ENST00000249299 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 MXRA5Q9NR99 2828 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 MDFIC2A0A1B0GVS7 189 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 IGLC7A0M8Q6 106 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 TEX22C9J3V5 150 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 IGHG2P01859 326 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 HKR1P10072 659 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 SNCAP37840 140 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 SULT1A1P50225 295 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 RAB11AP62491 216 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 HBG1P69891 147 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 HBG2P69892 147 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 TNP2Q05952 138 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 TMEM267Q0VDI3 215 aaPredicted RBP10.25□□□□□ -0.77
LSM8-201ENST00000249299 KLK9Q2XQG4 91 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 SIGLECL1Q8N7X8 197 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 SGMS2Q8NHU3 365 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
LSM8-201ENST00000249299 GGACTQ9BVM4 153 aa10.25□□□□□ -0.77
LSM8-201ENST00000249299 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms