RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 FOXB1Q99853 325 aa15.25■□□□□ 0.03
PTPN12-201ENST00000248594 LSM4Q9Y4Z0 139 aaKnown RBP15.25■□□□□ 0.03
PTPN12-201ENST00000248594 NGFP01138 241 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 ASCL4Q6XD76 172 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 FGF23Q9GZV9 251 aaPredicted RBP15.24■□□□□ 0.03
PTPN12-201ENST00000248594 ATMQ13315 3056 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 TNCP24821 2201 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 SPACA3Q8IXA5 215 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 PERPQ96FX8 193 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 IGFBP4P22692 258 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 SRD5A2P31213 254 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 MIR17HGQ75NE6 70 aa15.24■□□□□ 0.03
PTPN12-201ENST00000248594 IGLV2-14P01704 120 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 HTR1DP28221 377 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 NTF4P34130 210 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 PI4KAP42356 2102 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 SUMO3P55854 103 aaPredicted RBP15.23■□□□□ 0.03
PTPN12-201ENST00000248594 FAM71F2Q6NXP2 309 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 OR4A5Q8NH83 315 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 HSD17B10Q99714 261 aaKnown RBP15.23■□□□□ 0.03
PTPN12-201ENST00000248594 OR2H1Q9GZK4 316 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 TNFRSF19Q9NS68 423 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 A0A0J9YW62 118 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 A0A1B0GX78 115 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 MEF2CQ06413 473 aaPredicted RBP15.23■□□□□ 0.03
PTPN12-201ENST00000248594 PILRBQ9UKJ0 227 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 DYSFO75923 2080 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 LOC102723996A0A087X1L8 192 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 A6NJY4 79 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 H0YJW9 148 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 LEPROTL1O95214 131 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 TNFRSF4P43489 277 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 PRAMEF5Q5TYX0 476 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 PRAMEF6Q5VXH4 476 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 VWA1Q6PCB0 445 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 GTF2H5Q6ZYL4 71 aa15.23■□□□□ 0.03
PTPN12-201ENST00000248594 CNOT1A5YKK6 2376 aaKnown RBP15.22■□□□□ 0.03
PTPN12-201ENST00000248594 CXCL13O43927 109 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 SRYQ05066 204 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 TRBV9A0A0B4J1U6 114 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 STAG3L2P0CL84 134 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 STAG3L3P0CL85 134 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 AZU1P20160 251 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 GPR183P32249 361 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 RNPS1Q15287 305 aaKnown RBP15.22■□□□□ 0.03
PTPN12-201ENST00000248594 RAB30Q15771 203 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 SRXN1Q9BYN0 137 aa15.22■□□□□ 0.03
PTPN12-201ENST00000248594 IGLC1P0CG04 106 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 CXorf67Q86X51 503 aaPredicted RBP15.21■□□□□ 0.03
PTPN12-201ENST00000248594 TMEM38BQ9NVV0 291 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 TREML4Q6UXN2 200 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 BPIFA4PQ86YQ2 179 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 TRIB1Q96RU8 372 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 MGST2Q99735 147 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 WDR83OSQ9Y284 106 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 ZNF835Q9Y2P0 537 aa15.21■□□□□ 0.03
PTPN12-201ENST00000248594 CFHR1Q03591 330 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 C10orf128Q5T292 105 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 TMEM42Q69YG0 159 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 ANKRD37Q7Z713 158 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 OR52E5Q8NH55 327 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 OR4S2Q8NH73 311 aa15.21■□□□□ 0.02
PTPN12-201ENST00000248594 EP300Q09472 2414 aaPredicted RBP15.21■□□□□ 0.02
PTPN12-201ENST00000248594 C15orf62A8K5M9 175 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 PMS2P5A8MQ11 134 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 RHOBP62745 196 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 NPVFQ9HCQ7 196 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 FCGR3BO75015 233 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 SCCPDHQ8NBX0 429 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 SPSB4Q96A44 273 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 TMEM191AQ9H0A3 160 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 ZFAND5O76080 213 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 HIST1H1EP10412 219 aaKnown RBP15.2■□□□□ 0.02
PTPN12-201ENST00000248594 TMEM54Q969K7 222 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 PSG11Q9UQ72 335 aa15.2■□□□□ 0.02
PTPN12-201ENST00000248594 TMEM95Q3KNT9 176 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 OR4A16Q8NH70 328 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 GGTLC1Q9BX51 225 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 SAP30LQ9HAJ7 183 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 F11RQ9Y624 299 aaKnown RBP15.19■□□□□ 0.02
PTPN12-201ENST00000248594 C2orf70A6NJV1 201 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 ARF6P62330 175 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 CATR1Q13166 79 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 ZNF788Q6ZQV5 615 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 MMP17Q9ULZ9 603 aa15.19■□□□□ 0.02
PTPN12-201ENST00000248594 CD5LO43866 347 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 GRPP07492 148 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 EFNB3Q15768 340 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 PTGDSP41222 190 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 RBPJQ06330 500 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 MTURNQ8N3F0 131 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 TEX45Q8NA69 505 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 KCNIP1Q9NZI2 227 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 MRPL27Q9P0M9 148 aaKnown RBP15.18■□□□□ 0.02
PTPN12-201ENST00000248594 PIGBOS1A0A0B4J2F0 54 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 AHRRA9YTQ3 701 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 C5orf67F2Z3F1 127 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 ISLRO14498 428 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 LGALS7P47929 136 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms