RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 DOCK1Q14185 1865 aa8.78□□□□□ -1
SLF2-201ENST00000238961 KNL1Q8NG31 2342 aa8.78□□□□□ -1
SLF2-201ENST00000238961 ZNF561-AS1K7EIQ3 104 aa8.78□□□□□ -1
SLF2-201ENST00000238961 HMGA1P17096 107 aaKnown RBP8.78□□□□□ -1
SLF2-201ENST00000238961 LINC00299Q6ZSB3 139 aa8.78□□□□□ -1
SLF2-201ENST00000238961 MAVSQ7Z434 540 aa8.78□□□□□ -1
SLF2-201ENST00000238961 SLC25A38Q96DW6 304 aa8.78□□□□□ -1
SLF2-201ENST00000238961 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
SLF2-201ENST00000238961 COQ2Q96H96 371 aa8.78□□□□□ -1
SLF2-201ENST00000238961 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
SLF2-201ENST00000238961 ODAMA1E959 279 aa8.77□□□□□ -1
SLF2-201ENST00000238961 LIFP15018 202 aa8.77□□□□□ -1
SLF2-201ENST00000238961 CEACAM21Q3KPI0 293 aa8.77□□□□□ -1
SLF2-201ENST00000238961 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1
SLF2-201ENST00000238961 SIGMAR1Q99720 223 aa8.77□□□□□ -1
SLF2-201ENST00000238961 FBXL15Q9H469 300 aa8.77□□□□□ -1
SLF2-201ENST00000238961 ELOVL5Q9NYP7 299 aa8.77□□□□□ -1
SLF2-201ENST00000238961 SELENOKQ9Y6D0 94 aa8.77□□□□□ -1
SLF2-201ENST00000238961 PATE3B3GLJ2 98 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 GCM2O75603 506 aaPredicted RBP8.77□□□□□ -1.01
SLF2-201ENST00000238961 SCTP09683 121 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 COL4A1P02462 1669 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 B9A039 149 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 H0Y980 276 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 PTP4A3O75365 173 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 OR52E5Q8NH55 327 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 MRM2Q9UI43 246 aaKnown RBP8.77□□□□□ -1.01
SLF2-201ENST00000238961 COL11A1P12107 1806 aaPredicted RBP8.77□□□□□ -1.01
SLF2-201ENST00000238961 IGLV3-10A0A075B6K4 115 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 C5orf30Q96GV9 206 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 NDUFAF3Q9BU61 184 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 SPRED3Q2MJR0 410 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 SVIPQ8NHG7 77 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
SLF2-201ENST00000238961 PLAC1Q9HBJ0 212 aa8.77□□□□□ -1.01
SLF2-201ENST00000238961 EVI2AP22794 236 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SIGLEC14Q08ET2 396 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 DEFB104AQ8WTQ1 72 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 C21orf62Q9NYP8 219 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SRSF1Q07955 248 aaKnown RBP eCLIP8.76□□□□□ -1.01
SLF2-201ENST00000238961 ORMDL3Q8N138 153 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 RREB1Q92766 1687 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 TRGV1A0A0A0MS02 117 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 NR2C2APQ86WQ0 139 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 FGFRL1Q8N441 504 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 LEPROTO15243 131 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 ZG16O60844 167 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 GALP22466 123 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SSBP2P81877 361 aaPredicted RBP8.76□□□□□ -1.01
SLF2-201ENST00000238961 TNFRSF9Q07011 255 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 RIMKLAQ8IXN7 391 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 LRP5O75197 1615 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SS18Q15532 418 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 TMEFF2Q9UIK5 374 aaPredicted RBP8.76□□□□□ -1.01
SLF2-201ENST00000238961 FCN3O75636 299 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
SLF2-201ENST00000238961 ALKAL1Q6UXT8 129 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 C17orf47Q8NEP4 570 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 TMEM174Q8WUU8 243 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 SLC25A28Q96A46 364 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 C19orf24Q9BVV8 132 aa8.76□□□□□ -1.01
SLF2-201ENST00000238961 NBEAP1P0C6P0 100 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 DDTP30046 118 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 C12orf73Q69YU5 71 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 PLA2G2FQ9BZM2 168 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
SLF2-201ENST00000238961 GP6Q9HCN6 339 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 PRRC2BQ5JSZ5 2229 aaKnown RBP8.75□□□□□ -1.01
SLF2-201ENST00000238961 TEX48A0A1B0GUV7 120 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 TMEM8BA6NDV4 472 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 MMP23AO75900 390 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 FGF12P61328 243 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 TAL2Q16559 108 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 STPG2Q8N412 459 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 SMIM2Q9BVW6 85 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 MARCH11A6NNE9 402 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 J3QW42 95 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 EGR4Q05215 589 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
SLF2-201ENST00000238961 HEATR1Q9H583 2144 aaKnown RBP8.75□□□□□ -1.01
SLF2-201ENST00000238961 DPM2O94777 84 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 ERCC8Q13216 396 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 TBR1Q16650 682 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
SLF2-201ENST00000238961 TRAV8-3A0A0A6YYJ7 113 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 CT62P0C5K7 136 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
SLF2-201ENST00000238961 ZP4Q12836 540 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 FAM209AQ5JX71 171 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 OSR1Q8TAX0 266 aaPredicted RBP8.74□□□□□ -1.01
SLF2-201ENST00000238961 PRB2P02812 416 aaPredicted RBP8.74□□□□□ -1.01
SLF2-201ENST00000238961 POC1AQ8NBT0 407 aa8.74□□□□□ -1.01
SLF2-201ENST00000238961 OVOL2Q9BRP0 275 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms