RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 MMD2Q8IY49 270 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 SAT2Q96F10 170 aaPredicted RBP12.19□□□□□ -0.46
HDHD3-201ENST00000238379 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 CITED4Q96RK1 184 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 TMEM147Q9BVK8 224 aa12.19□□□□□ -0.46
HDHD3-201ENST00000238379 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
HDHD3-201ENST00000238379 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
HDHD3-201ENST00000238379 B4DSR2 109 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 MOSP00540 346 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 CA2P00918 260 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 CD24P25063 80 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 BSXQ3C1V8 233 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 FBLN7Q53RD9 439 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 PPP1R27Q86WC6 154 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 OR2G3Q8NGZ4 309 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 EAF1Q96JC9 268 aaPredicted RBP12.18□□□□□ -0.46
HDHD3-201ENST00000238379 UQCC1Q9NVA1 299 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 UBE2L5PA0A1B0GUS4 154 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 TEX46H3BTG2 121 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 NPFFO15130 113 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 S100A1P23297 94 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 F2RL1P55085 397 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 RAB11AP62491 216 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 REG4Q9BYZ8 158 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
HDHD3-201ENST00000238379 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 IFNA4P05014 189 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 SNRNP70P08621 437 aaKnown RBP12.17□□□□□ -0.46
HDHD3-201ENST00000238379 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-201ENST00000238379 MAS1LP35410 378 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 RAB5CP51148 216 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-201ENST00000238379 EBI3Q14213 229 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 HNF4GQ14541 408 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 TMEM182Q6ZP80 229 aaPredicted RBP12.17□□□□□ -0.46
HDHD3-201ENST00000238379 NPBQ8NG41 125 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 OR2T10Q8NGZ9 312 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDHD3-201ENST00000238379 RSG1Q9BU20 258 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 PFDN2Q9UHV9 154 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 CSMD2Q7Z408 3487 aa12.17□□□□□ -0.46
HDHD3-201ENST00000238379 A0A1W2PN81 502 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 MFSD2BA6NFX1 497 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 NDUFA3O95167 84 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 CHRNA7P36544 502 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 MMDQ15546 238 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 C2orf83Q53S99 150 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 MBD6Q96DN6 1003 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 UMAD1C9J7I0 102 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 FCN1O00602 326 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 NBR2O15453 112 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
HDHD3-201ENST00000238379 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
HDHD3-201ENST00000238379 FHITP49789 147 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 DLK1P80370 383 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 SSBP2P81877 361 aaPredicted RBP12.16□□□□□ -0.46
HDHD3-201ENST00000238379 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
HDHD3-201ENST00000238379 HES1Q14469 280 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 TNXAQ16473 311 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 Q8N6K4 173 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
HDHD3-201ENST00000238379 PARP11Q9NR21 331 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
HDHD3-201ENST00000238379 TRAV20A0A0B4J274 112 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 IGHV1-69DA0A0B4J2H0 117 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 TRIM77I1YAP6 450 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 ACTL6BO94805 426 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 IGHV1-69P01742 117 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 SNCAP37840 140 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 LOXL1Q08397 574 aaPredicted RBP12.15□□□□□ -0.46
HDHD3-201ENST00000238379 TUSC1Q2TAM9 212 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 Q6ZRG5 221 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 CENPVQ7Z7K6 275 aaPredicted RBP12.15□□□□□ -0.46
HDHD3-201ENST00000238379 C7orf69Q9H7B7 122 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
HDHD3-201ENST00000238379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.475e-9■■■□□ 17.1
HDHD3-201ENST00000238379 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
HDHD3-201ENST00000238379 Q5PR19 223 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 WDR83OSQ9Y284 106 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
HDHD3-201ENST00000238379 TRAV40A0A0B4J280 105 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 PRH1P02810 166 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 OR13C7P0DN81 318 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 FGF7P21781 194 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 GATA3P23771 443 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 PLGLAQ15195 96 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 AANATQ16613 207 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms