RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 RAC3P60763 192 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
MSH6-201ENST00000234420 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 HMGCLL1Q8TB92 370 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 CDCP2Q5VXM1 449 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 GPHA2Q96T91 129 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 C17orf51A8MQB3 221 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 GGTLC3B5MD39 225 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 RAB9AP51151 201 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 GNLYP22749 145 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 GFI1BQ5VTD9 330 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 RNF122Q9H9V4 155 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 CACNA1BQ00975 2339 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 DDX60LQ5H9U9 1706 aaKnown RBP9.51□□□□□ -0.89
MSH6-201ENST00000234420 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 H2BFSP57053 126 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 HSPE1P61604 102 aaKnown RBP9.51□□□□□ -0.89
MSH6-201ENST00000234420 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 KLK8O60259 260 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 SLC25A28Q96A46 364 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 JMJD8Q96S16 334 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 VSIG8P0DPA2 414 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 TMEM91Q6ZNR0 172 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 A0A0G2JLM5 398 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 ZP4Q12836 540 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 A0A0A6YYD5 115 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 PLPP3O14495 311 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 LILRA1O75019 489 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 CEACAM4O75871 244 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 FAM71F2Q6NXP2 309 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 TMEM30AQ9NV96 361 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 IL36BQ9NZH7 164 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 SCN10AQ9Y5Y9 1956 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 LOXL4Q96JB6 756 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 GAGE12BA1L429 117 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 KIR3DL3Q8N743 410 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 SIGLEC12Q96PQ1 595 aa9.5□□□□□ -0.89
MSH6-201ENST00000234420 MAST2Q6P0Q8 1798 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 TRAV9-2A0A087WT02 112 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 RAMP1O60894 148 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 CT62P0C5K7 136 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 ADMP35318 185 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 PCSK4Q6UW60 755 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 C1QL2Q7Z5L3 287 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 HOGA1Q86XE5 327 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 PPP1R3EQ9H7J1 279 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 FOXI3A8MTJ6 420 aaPredicted RBP9.49□□□□□ -0.89
MSH6-201ENST00000234420 IGLV3-27P01718 113 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 TDGF1P3P51864 188 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 LINC00527Q9UJ94 153 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 CD1AP06126 327 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 VENTXO95231 258 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 TRPM7Q96QT4 1865 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 LOC101059948A0A1B0GTJ6 334 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 LEPP41159 167 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 NPC2P61916 151 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 BRWD3Q6RI45 1802 aa9.49□□□□□ -0.89
MSH6-201ENST00000234420 M0R381 172 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 RPS11P62280 158 aaKnown RBP eCLIP9.48□□□□□ -0.89
MSH6-201ENST00000234420 UBE2V1Q13404 147 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 MSRB3Q8IXL7 192 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 PAPPAQ13219 1627 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 GREB1Q4ZG55 1949 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 FOXH1O75593 365 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 LSM4Q9Y4Z0 139 aaKnown RBP9.48□□□□□ -0.89
MSH6-201ENST00000234420 SYNGR3O43761 229 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 NCR2O95944 276 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 CTGFP29279 349 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 UNC119Q13432 240 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 ABHD12Q8N2K0 398 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 RPL36A-HNRNPH2H7BZ11 118 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 IGHV3-53P01767 116 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 C8orf88P0DMB2 117 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 MRPL20Q9BYC9 149 aaKnown RBP9.48□□□□□ -0.89
MSH6-201ENST00000234420 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
MSH6-201ENST00000234420 CEACAM1P13688 526 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 BSPH1Q075Z2 132 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 FAM27E3Q08E93 113 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 C2orf68Q2NKX9 166 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 CD300LDQ6UXZ3 194 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 DNM1P46Q6ZS02 220 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 DUSP15Q9H1R2 295 aaPredicted RBP9.48□□□□□ -0.89
MSH6-201ENST00000234420 IGKV1D-33P01593 117 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 IGKV1-33P01594 117 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 GZMHP20718 246 aa9.48□□□□□ -0.89
MSH6-201ENST00000234420 SUMO3P55854 103 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms