RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 AWAT1Q58HT5 328 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 ARSJQ5FYB0 599 aaPredicted RBP12.92□□□□□ -0.34
ITGA4-201ENST00000233573 ZNF709Q8N972 641 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 MGST2Q99735 147 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 PLEKHA3Q9HB20 300 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 IFNA4P05014 189 aa12.91□□□□□ -0.34
ITGA4-201ENST00000233573 CYB561D1Q8N8Q1 229 aa12.91□□□□□ -0.34
ITGA4-201ENST00000233573 OR4A5Q8NH83 315 aa12.91□□□□□ -0.34
ITGA4-201ENST00000233573 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
ITGA4-201ENST00000233573 C22orf46C9J442 243 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 OPN1MWP04001 364 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
ITGA4-201ENST00000233573 IL3RAP26951 378 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 OPRK1P41145 380 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 BEND2Q8NDZ0 799 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 RAB1CQ92928 201 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 SLC25A22Q9H936 323 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 UNKLQ9H9P5 680 aaKnown RBP12.9□□□□□ -0.34
ITGA4-201ENST00000233573 NDUFA4L2Q9NRX3 87 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 A0A1W2PPH5 198 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 C7orf77A4D0Y5 90 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 ZFP92A6NM28 416 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 INS-IGF2F8WCM5 200 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 SOX15O60248 233 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 USF1P22415 310 aaPredicted RBP12.9□□□□□ -0.34
ITGA4-201ENST00000233573 MC5RP33032 325 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 RAB13P51153 203 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 RPL8P62917 257 aaKnown RBP12.9□□□□□ -0.34
ITGA4-201ENST00000233573 MRGPRG-AS1Q2M3A8 158 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 TIMD4Q96H15 378 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 RITA1Q96K30 269 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 GGTLC1Q9BX51 225 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
ITGA4-201ENST00000233573 NPVFQ9HCQ7 196 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 FAM208BQ5VWN6 2430 aa12.9□□□□□ -0.34
ITGA4-201ENST00000233573 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 E7EUB6 86 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 YIF1AO95070 293 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 ATP5IP56385 69 aaPredicted RBP12.89□□□□□ -0.35
ITGA4-201ENST00000233573 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 VSTM2AQ8TAG5 236 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 CLEC7AQ9BXN2 247 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 CHODLQ9H9P2 273 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 CGB1A6NKQ9 187 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 BUB1B-PAK6H3BSN5 160 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 DEFA4P12838 97 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 PRRX1P54821 245 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
ITGA4-201ENST00000233573 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
ITGA4-201ENST00000233573 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
ITGA4-201ENST00000233573 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
ITGA4-201ENST00000233573 LIPFP07098 398 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
ITGA4-201ENST00000233573 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
ITGA4-201ENST00000233573 AKR1C3P42330 323 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 FAM90A2PQ658T7 463 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 OR1L8Q8NGR8 309 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 P2RX4Q99571 388 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 RPS10P5Q9NQ39 176 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 VAX2Q9UIW0 290 aa12.88□□□□□ -0.35
ITGA4-201ENST00000233573 H3BQ15 152 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 LY6LH3BQJ8 138 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 M0R036 132 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
ITGA4-201ENST00000233573 CYB5BO43169 146 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 PAX6P26367 422 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 RHEBQ15382 184 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 A1L4Q6 167 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 COLCA2A8K830 154 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 LGALS7P47929 136 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
ITGA4-201ENST00000233573 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 MIC13Q5XKP0 118 aa12.87□□□□□ -0.35
ITGA4-201ENST00000233573 ZNF430Q9H8G1 570 aaPredicted RBP12.87□□□□□ -0.35
ITGA4-201ENST00000233573 PUS1Q9Y606 427 aaKnown RBP eCLIP12.87□□□□□ -0.35
ITGA4-201ENST00000233573 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 IGHV1-3A0A0C4DH29 117 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 IFNA1P01562 189 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
ITGA4-201ENST00000233573 TPSG1Q9NRR2 321 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms