RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PMCHL2Q9BQD1 86 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 CECR9P0C854 216 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 C9JCJ5 164 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 SMAGPQ0VAQ4 97 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 LIPFP07098 398 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 ADMP35318 185 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 IGKV1D-13A0A0B4J2D9 117 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 IGKV1-13P0DP09 117 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 PLPPR1Q8TBJ4 325 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 SLC25A28Q96A46 364 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 UNC13CQ8NB66 2214 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 HAX1O00165 279 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 PPP1R17O96001 155 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 CD55P08174 381 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.6
NEK4-201ENST00000233027 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.6
NEK4-201ENST00000233027 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.6
NEK4-201ENST00000233027 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.6
NEK4-201ENST00000233027 M0R381 172 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 SP9P0CG40 484 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 HOXA5P20719 270 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 C1QTNF5Q9BXJ0 243 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.61
NEK4-201ENST00000233027 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 GNG5P63218 68 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 GFI1Q99684 422 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 IFNL4K9M1U5 179 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 TGFAP01135 160 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
NEK4-201ENST00000233027 MRPL20Q9BYC9 149 aaKnown RBP11.27□□□□□ -0.61
NEK4-201ENST00000233027 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 PRDM6Q9NQX0 595 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 A0A087WWC5 75 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 DNM1P46Q6ZS02 220 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 CHD5Q8TDI0 1954 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 WFDC1Q9HC57 220 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 FADS6Q8N9I5 356 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 RAMP3O60896 148 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 C1QTNF9P0C862 333 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 CA7P43166 264 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
NEK4-201ENST00000233027 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
NEK4-201ENST00000233027 FOXC2Q99958 501 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 SSBP4Q9BWG4 385 aaPredicted RBP11.25□□□□□ -0.61
NEK4-201ENST00000233027 PSMB11A5LHX3 300 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 H0YIZ8 118 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 IGHV1-2P23083 117 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 TMEM106BQ9NUM4 274 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 SERF1AO75920 110 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 LYPD3O95274 346 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
NEK4-201ENST00000233027 TMPRSS3P57727 454 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 PSG7Q13046 419 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 J3QRE1 110 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 NPFFO15130 113 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 KLRB1Q12918 225 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
NEK4-201ENST00000233027 BRCA1P38398 1863 aaKnown RBP11.24□□□□□ -0.61
NEK4-201ENST00000233027 NDUFA3O95167 84 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 CIRBPQ14011 172 aaKnown RBP11.24□□□□□ -0.61
NEK4-201ENST00000233027 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 Q9H3A6 140 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 IGKV1-9A0A0C4DH69 117 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 TRGV3P03979 118 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 SAPCD1Q5SSQ6 148 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
NEK4-201ENST00000233027 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 IZUMO1RA6ND01 250 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 COX6B1P14854 86 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 CCL20P78556 96 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 CHRNA10Q9GZZ6 450 aa11.24□□□□□ -0.61
NEK4-201ENST00000233027 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
NEK4-201ENST00000233027 KBTBD11-OT1A0A1B0GTJ5 212 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 OR11H1Q8NG94 326 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
NEK4-201ENST00000233027 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms