RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 CD1BP29016 333 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 CHRNA7P36544 502 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 PPT1P50897 306 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 ERVFRD-1P60508 538 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 ZNF616Q08AN1 781 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 ARL16Q0P5N6 197 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 RAB31Q13636 194 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 C2orf83Q53S99 150 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 OR2B11Q5JQS5 317 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 WDR25Q64LD2 544 aaPredicted RBP8.66□□□□□ -1.02
CDCA3-201ENST00000229265 SPSB3Q6PJ21 355 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
CDCA3-201ENST00000229265 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
CDCA3-201ENST00000229265 HAPLN4Q86UW8 402 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 LRRC75A-AS1Q8N1F1 130 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 MDFIQ99750 246 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 C19orf24Q9BVV8 132 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
CDCA3-201ENST00000229265 SH3BGRL3Q9H299 93 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 NARFLQ9H6Q4 476 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 TCF19Q9Y242 345 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
CDCA3-201ENST00000229265 MALRD1Q5VYJ5 2156 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 C15orf62A8K5M9 175 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 OOSP1A8MZH6 123 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 FCN3O75636 299 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 GPX4P36969 197 aaPredicted RBP8.65□□□□□ -1.02
CDCA3-201ENST00000229265 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDCA3-201ENST00000229265 ATP5J2P56134 94 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 ERHP84090 104 aaKnown RBP8.65□□□□□ -1.02
CDCA3-201ENST00000229265 TMEM267Q0VDI3 215 aaPredicted RBP8.65□□□□□ -1.02
CDCA3-201ENST00000229265 SSX2Q16385 188 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 ETV3LQ6ZN32 361 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 TGIF2LXQ8IUE1 241 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 OR11H6Q8NGC7 330 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 OR1L8Q8NGR8 309 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
CDCA3-201ENST00000229265 TXNDC17Q9BRA2 123 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 CLEC7AQ9BXN2 247 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 TUBA4BQ9H853 241 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 OR51B2Q9Y5P1 312 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 JMJD1CQ15652 2540 aa8.65□□□□□ -1.02
CDCA3-201ENST00000229265 DYSFO75923 2080 aa8.65□□□□□ -1.03
CDCA3-201ENST00000229265 FAM157AC9JC47 383 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 H3BP45 60 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 BUB1B-PAK6H3BSN5 160 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 IFNA1P01562 189 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 CCL3L1P16619 93 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 CEACAM3P40198 252 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 OPRK1P41145 380 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 GNG10P50151 68 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 EFNA4P52798 201 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 LINC00205P59089 165 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 SRSF2Q01130 221 aaKnown RBP8.64□□□□□ -1.03
CDCA3-201ENST00000229265 DEFA5Q01523 94 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 BSXQ3C1V8 233 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 ACOT6Q3I5F7 207 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-201ENST00000229265 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 SFT2D1Q8WV19 159 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 LEAP2Q969E1 77 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
CDCA3-201ENST00000229265 NKX6-2Q9C056 277 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-201ENST00000229265 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-201ENST00000229265 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 RPRMQ9NS64 109 aa8.64□□□□□ -1.03
CDCA3-201ENST00000229265 TEX50A0A1B0GTY4 177 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 NXPH3O95157 252 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 FOSL1P15407 271 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 PRTN3P24158 256 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 RPL8P62917 257 aaKnown RBP8.63□□□□□ -1.03
CDCA3-201ENST00000229265 HLA-DRB5Q30154 266 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 OR8G2PQ6IF36 304 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 PNKDQ8N490 385 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 COMMD5Q9GZQ3 224 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 MS4A7Q9GZW8 240 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-201ENST00000229265 INSIG2Q9Y5U4 225 aa8.63□□□□□ -1.03
CDCA3-201ENST00000229265 LOC105371242A0A075B767 164 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 IGHV2-26A0A0B4J1V2 119 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 CTXND1A0A1B0GTU2 59 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 A0A1W2PPE3 182 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
CDCA3-201ENST00000229265 B4DEV8 164 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 SEC14L6B5MCN3 397 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 LY6LH3BQJ8 138 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 IFNA4P05014 189 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 NPY1RP25929 384 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 RPL29P47914 159 aaKnown RBP8.62□□□□□ -1.03
CDCA3-201ENST00000229265 PSMB3P49720 205 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 RPS16P62249 146 aaKnown RBP8.62□□□□□ -1.03
CDCA3-201ENST00000229265 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms