RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TMEM68Q96MH6 324 aa14□□□□□ -0.17
PFN1-201ENST00000225655 TMEM56Q96MV1 263 aa14□□□□□ -0.17
PFN1-201ENST00000225655 SPIN2AQ99865 258 aa14□□□□□ -0.17
PFN1-201ENST00000225655 SPIN2BQ9BPZ2 258 aa14□□□□□ -0.17
PFN1-201ENST00000225655 ALX4Q9H161 411 aaPredicted RBP14□□□□□ -0.17
PFN1-201ENST00000225655 TMEM56-RWDD3S4R434 201 aa14□□□□□ -0.17
PFN1-201ENST00000225655 TRAV41A0A0B4J266 112 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 DUXBA0A1W2PPF3 345 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 IGLV1-40P01703 118 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 ANXA7P20073 488 aaKnown RBP13.99□□□□□ -0.17
PFN1-201ENST00000225655 PJVKQ0ZLH3 352 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 CACFD1Q9UGQ2 172 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 WSB1Q9Y6I7 421 aa13.99□□□□□ -0.17
PFN1-201ENST00000225655 A0A0B4J2A0 478 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 G3V318 75 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 PTTG1O95997 202 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 IGKV1-39P01597 117 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 IGKV1D-39P04432 117 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 RPL27AP46776 148 aaKnown RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 SUPT4H1P63272 117 aaKnown RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 CD69Q07108 199 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 KIAA0141Q14154 515 aaPredicted RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 ECSCRQ19T08 205 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 C9orf66Q5T8R8 295 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 THOC7Q6I9Y2 204 aaKnown RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 C11orf87Q6NUJ2 197 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 TMEM65Q6PI78 240 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 NRARPQ7Z6K4 114 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 LYG2Q86SG7 212 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 SELENOHQ8IZQ5 122 aaKnown RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 SRSF12Q8WXF0 261 aaKnown RBP13.98□□□□□ -0.17
PFN1-201ENST00000225655 PDCD10Q9BUL8 212 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 SHPKQ9UHJ6 478 aa13.98□□□□□ -0.17
PFN1-201ENST00000225655 C9orf170A2RU37 121 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 CRIP2P52943 208 aaPredicted RBP13.97□□□□□ -0.17
PFN1-201ENST00000225655 RUNX1Q01196 453 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 DHRS2Q13268 280 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 AKIRIN2Q53H80 203 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 UNQ5815/PRO19632Q6UWF5 114 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 ZNF491Q8N8L2 437 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 DUSP18Q8NEJ0 188 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 OR5B3Q8NH48 314 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
PFN1-201ENST00000225655 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
PFN1-201ENST00000225655 GPN1Q9HCN4 374 aaPredicted RBP13.97□□□□□ -0.17
PFN1-201ENST00000225655 MSGN1A6NI15 193 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 C15orf61A6NNL5 157 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 SEC14L6B5MCN3 397 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 IGKV1-5P01602 117 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 NDPQ00604 133 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 HSD17B13Q7Z5P4 300 aaPredicted RBP13.96□□□□□ -0.17
PFN1-201ENST00000225655 SLC35G3Q8N808 338 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 LRTM2Q8N967 370 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 OR1L8Q8NGR8 309 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 FYTTD1Q96QD9 318 aaKnown RBP13.96□□□□□ -0.17
PFN1-201ENST00000225655 FAM103A1Q9BTL3 118 aaKnown RBP13.96□□□□□ -0.17
PFN1-201ENST00000225655 FOXA2Q9Y261 457 aaPredicted RBP13.96□□□□□ -0.17
PFN1-201ENST00000225655 OR51B2Q9Y5P1 312 aa13.96□□□□□ -0.17
PFN1-201ENST00000225655 I3L521 148 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 PRAF2O60831 178 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 DHFRP00374 187 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 IFNA21P01568 189 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 IL6RP08887 468 aaPredicted RBP13.95□□□□□ -0.18
PFN1-201ENST00000225655 OR8U8P0C7N1 319 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 MECP2P51608 486 aaKnown RBP13.95□□□□□ -0.18
PFN1-201ENST00000225655 OR2B8PP59922 312 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 C19orf54Q5BKX5 351 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 LFNGQ8NES3 379 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 OR1N2Q8NGR9 330 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 SRSF8Q9BRL6 282 aaKnown RBP13.95□□□□□ -0.18
PFN1-201ENST00000225655 QTRT1Q9BXR0 403 aaKnown RBP13.95□□□□□ -0.18
PFN1-201ENST00000225655 GNB4Q9HAV0 340 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 ZNF257Q9Y2Q1 563 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 TMED3Q9Y3Q3 217 aa13.95□□□□□ -0.18
PFN1-201ENST00000225655 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 INMT-MINDY4F8WBC2 141 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 OR9G9P0C7N8 305 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 TRAPPC2P0DI81 140 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 TRAPPC2BP0DI82 140 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 RAB9AP51151 201 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 MRGPRG-AS1Q2M3A8 158 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 RGS21Q2M5E4 152 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 ANKRD55Q3KP44 614 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 LHFPL5Q8TAF8 219 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 HINT2Q9BX68 163 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.94□□□□□ -0.18
PFN1-201ENST00000225655 TMEM14BQ9NUH8 114 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 PRR13Q9NZ81 148 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 NSG2Q9Y328 171 aa13.94□□□□□ -0.18
PFN1-201ENST00000225655 A0A1W2PN81 502 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 CYB5BO43169 146 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 SULT1A3P0DMM9 295 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 SULT1A4P0DMN0 295 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 CHRNA7P36544 502 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 ZNF616Q08AN1 781 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 C10orf55Q5SWW7 151 aa13.93□□□□□ -0.18
PFN1-201ENST00000225655 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms