RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 RNASE8Q8TDE3 154 aaKnown RBP8.04□□□□□ -1.12
TUBB1-201ENST00000217133 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
TUBB1-201ENST00000217133 ENY2Q9NPA8 101 aa8.04□□□□□ -1.12
TUBB1-201ENST00000217133 KIAA1549Q9HCM3 1950 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 MGAQ8IWI9 3026 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 M0R1X1 148 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 SPINT2O43291 252 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 HSBP1O75506 76 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 FOXH1O75593 365 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 NDUFB8O95169 186 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 TFF1P04155 84 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 CTRLP40313 264 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 ZNF83P51522 516 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 PRRX1P54821 245 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 CX3CL1P78423 397 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 EDDM3AQ14507 147 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 TRIP6Q15654 476 aaKnown RBP8.03□□□□□ -1.12
TUBB1-201ENST00000217133 C3AR1Q16581 482 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 TEPPQ6URK8 271 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 Q6ZVH6 145 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 OR7C2O60412 319 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 CLDN18P56856 261 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 SLC35E4Q6ICL7 350 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 ASCL5Q7RTU5 278 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 MAP1BP46821 2468 aaKnown RBP8.03□□□□□ -1.12
TUBB1-201ENST00000217133 ADAMTS20P59510 1910 aa8.03□□□□□ -1.12
TUBB1-201ENST00000217133 APCSP02743 223 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 AMY1AP04745 511 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 Q0VFX4 171 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 FOXF2Q12947 444 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 LCN12Q6JVE5 192 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 Q8N976 141 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 WDR31Q8NA23 367 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 IL19Q9UHD0 177 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 LY96Q9Y6Y9 160 aa8.02□□□□□ -1.12
TUBB1-201ENST00000217133 TNRC6AQ8NDV7 1962 aaKnown RBP8.02□□□□□ -1.13
TUBB1-201ENST00000217133 PIEZO1Q92508 2521 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 MMP23AO75900 390 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 USF1P22415 310 aaPredicted RBP8.02□□□□□ -1.13
TUBB1-201ENST00000217133 Q56UQ5 140 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 TMEM136Q6ZRR5 245 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 PPP1R32Q7Z5V6 425 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 C11orf52Q96A22 123 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 GAL3ST2Q9H3Q3 398 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 NKX6-3A6NJ46 265 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 CA2P00918 260 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 IGHV3-13P01766 116 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 IGHV3-7P01780 117 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 TSPOP30536 169 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 HOXA4Q00056 320 aaPredicted RBP8.02□□□□□ -1.13
TUBB1-201ENST00000217133 UBE2V1Q13404 147 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 VAMP3Q15836 100 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 SAPCD1Q5SSQ6 148 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 ETFRF1Q6IPR1 90 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.13
TUBB1-201ENST00000217133 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 MAGEA5P43359 124 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 EIF4EBP1Q13541 118 aaPredicted RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 PMCHL1Q16048 86 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 IBA57Q5T440 356 aaKnown RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 SLC25A40Q8TBP6 338 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 FAM173AQ9BQD7 235 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 TCF19Q9Y242 345 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 LOXL2Q9Y4K0 774 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 DOCK10Q96BY6 2186 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 BMPR1BO00238 502 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 GFRA3O60609 400 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 COL8A2P25067 703 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 NPY1RP25929 384 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 MAJINQ3KP22 176 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 TSKUQ8WUA8 353 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 COQ2Q96H96 371 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 S1PR3Q99500 378 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 DCTN5Q9BTE1 182 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 TNRC6BQ9UPQ9 1833 aaKnown RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 SAA2-SAA4A0A096LPE2 208 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 ABHD17BQ5VST6 288 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 TIPARPQ7Z3E1 657 aaKnown RBP8.01□□□□□ -1.13
TUBB1-201ENST00000217133 NIT1Q86X76 327 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 ZNF439Q8NDP4 499 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 FAM216AQ8WUB2 273 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 HES7Q9BYE0 225 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 CDC42EP3Q9UKI2 254 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 COX11Q9Y6N1 276 aa8.01□□□□□ -1.13
TUBB1-201ENST00000217133 CACNA1GO43497 2377 aa8□□□□□ -1.13
TUBB1-201ENST00000217133 TRAV3A0A0B4J244 114 aa8□□□□□ -1.13
TUBB1-201ENST00000217133 M0R2Z0 102 aa8□□□□□ -1.13
TUBB1-201ENST00000217133 CELA3BP08861 270 aa8□□□□□ -1.13
TUBB1-201ENST00000217133 IGFBP2P18065 325 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms