RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 COMMD5Q9GZQ3 224 aa24.05■■□□□ 1.44
PABPN1-201ENST00000216727 CHODLQ9H9P2 273 aa24.05■■□□□ 1.44
PABPN1-201ENST00000216727 RPS10P5Q9NQ39 176 aa24.05■■□□□ 1.44
PABPN1-201ENST00000216727 NDUFA4L2Q9NRX3 87 aa24.05■■□□□ 1.44
PABPN1-201ENST00000216727 OPN1MWP04001 364 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 FBP1P09467 338 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 OPN1MW2P0DN77 364 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 OPN1MW3P0DN78 364 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 C2orf83Q53S99 150 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 OR1L8Q8NGR8 309 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 RAB24Q969Q5 203 aa24.04■■□□□ 1.44
PABPN1-201ENST00000216727 HRNRQ86YZ3 2850 aaPredicted RBP24.04■■□□□ 1.44
PABPN1-201ENST00000216727 LRBAP50851 2863 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 A0A1W2PPR1 153 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 SEC14L6B5MCN3 397 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 SNRNP70P08621 437 aaKnown RBP24.03■■□□□ 1.44
PABPN1-201ENST00000216727 FAM122CQ6P4D5 195 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 GGTLC1Q9BX51 225 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 KCNIP2Q9NS61 270 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 LIPFP07098 398 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 PAX6P26367 422 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 LGALS7P47929 136 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 C1orf159Q96HA4 380 aa24.03■■□□□ 1.44
PABPN1-201ENST00000216727 AKIRIN2Q53H80 203 aa24.02■■□□□ 1.44
PABPN1-201ENST00000216727 PUS1Q9Y606 427 aaKnown RBP eCLIP24.02■■□□□ 1.44
PABPN1-201ENST00000216727 BUB1B-PAK6H3BSN5 160 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 TAGLN2P37802 199 aaKnown RBP24.01■■□□□ 1.43
PABPN1-201ENST00000216727 TEPPQ6URK8 271 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 C20orf24Q9BUV8 137 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 H3BQ15 152 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 CDC34P49427 236 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-201ENST00000216727 VMA21Q3ZAQ7 101 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 TUBA4BQ9H853 241 aa24.01■■□□□ 1.43
PABPN1-201ENST00000216727 PATZ1Q9HBE1 687 aaKnown RBP24.01■■□□□ 1.43
PABPN1-201ENST00000216727 EIF3GO75821 320 aaKnown RBP eCLIP24■■□□□ 1.43
PABPN1-201ENST00000216727 TMEM249Q2WGJ8 235 aa24■■□□□ 1.43
PABPN1-201ENST00000216727 C22orf46C9J442 243 aa24■■□□□ 1.43
PABPN1-201ENST00000216727 YIF1AO95070 293 aa24■■□□□ 1.43
PABPN1-201ENST00000216727 CEBPGP53567 150 aa24■■□□□ 1.43
PABPN1-201ENST00000216727 PXMP4Q9Y6I8 212 aa24■■□□□ 1.43
PABPN1-201ENST00000216727 RNASE2P10153 161 aaKnown RBP23.99■■□□□ 1.43
PABPN1-201ENST00000216727 PLA2G5P39877 138 aa23.99■■□□□ 1.43
PABPN1-201ENST00000216727 AMMECR1Q9Y4X0 333 aaPredicted RBP23.99■■□□□ 1.43
PABPN1-201ENST00000216727 A0A1W2PN81 502 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 HMGB3O15347 200 aaKnown RBP23.98■■□□□ 1.43
PABPN1-201ENST00000216727 NDUFS6O75380 124 aaKnown RBP23.98■■□□□ 1.43
PABPN1-201ENST00000216727 CHRNA7P36544 502 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 AKR1C3P42330 323 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 DLX1P56177 255 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 RAB31Q13636 194 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 FAM90A2PQ658T7 463 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 NIPSNAP3BQ9BS92 247 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 MANBALQ9NQG1 85 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 ERHP84090 104 aaKnown RBP23.98■■□□□ 1.43
PABPN1-201ENST00000216727 C15orf54Q8N8G6 183 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 OR10W1Q8NGF6 305 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 OR4P4Q8NGL7 312 aa23.98■■□□□ 1.43
PABPN1-201ENST00000216727 ZNF430Q9H8G1 570 aaPredicted RBP23.98■■□□□ 1.43
PABPN1-201ENST00000216727 SLC35E3Q7Z769 313 aa23.97■■□□□ 1.43
PABPN1-201ENST00000216727 TMPRSS5Q9H3S3 457 aa23.97■■□□□ 1.43
PABPN1-201ENST00000216727 ONECUT1Q9UBC0 465 aa23.97■■□□□ 1.43
PABPN1-201ENST00000216727 INSIG2Q9Y5U4 225 aa23.97■■□□□ 1.43
PABPN1-201ENST00000216727 IGHV1-3A0A0C4DH29 117 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 COLCA2A8K830 154 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 PSMB3P49720 205 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 MEF2BQ02080 365 aaPredicted RBP23.96■■□□□ 1.43
PABPN1-201ENST00000216727 GCSAMLQ5JQS6 135 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 MIC13Q5XKP0 118 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 RPL29P47914 159 aaKnown RBP23.96■■□□□ 1.43
PABPN1-201ENST00000216727 TEX45Q8NA69 505 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 RITA1Q96K30 269 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 DCHS2Q6V1P9 2916 aa23.96■■□□□ 1.43
PABPN1-201ENST00000216727 SLC25A17O43808 307 aa23.95■■□□□ 1.42
PABPN1-201ENST00000216727 COX7A1P24310 79 aa23.95■■□□□ 1.42
PABPN1-201ENST00000216727 TVP23CQ96ET8 276 aa23.95■■□□□ 1.42
PABPN1-201ENST00000216727 SSBP3Q9BWW4 388 aaPredicted RBP23.95■■□□□ 1.42
PABPN1-201ENST00000216727 A0A1W2PPV4 95 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 E7EUB6 86 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 LY6LH3BQJ8 138 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 ENSAO43768 121 aaKnown RBP23.94■■□□□ 1.42
PABPN1-201ENST00000216727 IGFBP2P18065 325 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 TMEM144Q7Z5S9 345 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 IGHV3-72A0A0B4J1Y9 119 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 CGB1A6NKQ9 187 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 A6NNC1 897 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 M0R1W7 72 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 DEFA4P12838 97 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 CD81P60033 236 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 B2MP61769 119 aa23.94■■□□□ 1.42
PABPN1-201ENST00000216727 C19orf84I3L1E1 186 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 PRB3Q04118 309 aaPredicted RBP23.93■■□□□ 1.42
PABPN1-201ENST00000216727 MRGPRG-AS1Q2M3A8 158 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 RPEQ96AT9 228 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 LOC105371242A0A075B767 164 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 PNKDQ8N490 385 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 STPG3Q8N7X2 389 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 CACNG8Q8WXS5 425 aa23.93■■□□□ 1.42
PABPN1-201ENST00000216727 CD69Q07108 199 aa23.92■■□□□ 1.42
PABPN1-201ENST00000216727 OR11H6Q8NGC7 330 aa23.92■■□□□ 1.42
PABPN1-201ENST00000216727 SSMEM1Q8WWF3 244 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms