RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 G3V3Q6 166 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 H0YIZ8 118 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 FCN1O00602 326 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
POLR2E-201ENST00000215587 CHST1O43916 411 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 GPR137BO60478 399 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 HLA-DRB1P01911 266 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 OPN1MWP04001 364 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 OPN1MW2P0DN77 364 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 OPN1MW3P0DN78 364 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 IAPPP10997 89 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 MYOD1P15172 320 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 CHRNA7P36544 502 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 RPL23AP62750 156 aaKnown RBP13.18□□□□□ -0.3
POLR2E-201ENST00000215587 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 DCUN1D4Q92564 292 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 RNF126Q9BV68 326 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
POLR2E-201ENST00000215587 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 LYL1P12980 280 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
POLR2E-201ENST00000215587 TAS2R30P59541 319 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 FXYD3Q14802 87 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 NOXA1Q86UR1 476 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
POLR2E-201ENST00000215587 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
POLR2E-201ENST00000215587 NDUFA4L2Q9NRX3 87 aa13.17□□□□□ -0.3
POLR2E-201ENST00000215587 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 CX3CL1P78423 397 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 GRPEL2Q8TAA5 225 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
POLR2E-201ENST00000215587 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 WSB1Q9Y6I7 421 aa13.16□□□□□ -0.3
POLR2E-201ENST00000215587 INAFM1C9JVW0 142 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 P2RY1P47900 373 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 CAV2P51636 162 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
POLR2E-201ENST00000215587 TMEM65Q6PI78 240 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 INO80EQ8NBZ0 244 aaPredicted RBP13.15□□□□□ -0.3
POLR2E-201ENST00000215587 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 C11orf1Q9H5F2 150 aa13.15□□□□□ -0.3
POLR2E-201ENST00000215587 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 HMSDA8MTL9 139 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 ARPC5O15511 151 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 TSC22D2O75157 780 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 VDAC2P45880 294 aaPredicted RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 EIF2B2P49770 351 aaKnown RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 SSBP2P81877 361 aaPredicted RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 ERHP84090 104 aaKnown RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 C9orf152Q5JTZ5 239 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 ZC4H2Q9NQZ6 224 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 TNFSF18Q9UNG2 199 aa13.14□□□□□ -0.31
POLR2E-201ENST00000215587 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
POLR2E-201ENST00000215587 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 MSGN1A6NI15 193 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 H3BP45 60 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 TMEM50AO95807 157 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 IFNA10P01566 189 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 SNCAP37840 140 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 PAX9P55771 341 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
POLR2E-201ENST00000215587 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
POLR2E-201ENST00000215587 PAIP2BQ9ULR5 123 aaKnown RBP13.13□□□□□ -0.31
POLR2E-201ENST00000215587 A0A1B0GW64 132 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 SH2D7A6NKC9 451 aaPredicted RBP13.12□□□□□ -0.31
POLR2E-201ENST00000215587 TEX22C9J3V5 150 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 E7EUB6 86 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 KCNAB3O43448 404 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 AMY1AP04745 511 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 OR13C7P0DN81 318 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
POLR2E-201ENST00000215587 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
POLR2E-201ENST00000215587 NDPQ00604 133 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 U3KQ87 197 aa13.12□□□□□ -0.31
POLR2E-201ENST00000215587 IGLC7A0M8Q6 106 aa13.11□□□□□ -0.31
POLR2E-201ENST00000215587 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
POLR2E-201ENST00000215587 SCAF4O95104 1147 aaKnown RBP13.11□□□□□ -0.31
POLR2E-201ENST00000215587 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms