RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RPS16P62249 146 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 RARRES2Q99969 163 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 J3QKU1 62 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 KBTBD11O94819 623 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 IGLV2-23P01705 113 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 MYOD1P15172 320 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 RITA1Q96K30 269 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 DPM3Q9P2X0 92 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 PRNDQ9UKY0 176 aa15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 POLR3KQ9Y2Y1 108 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-201ENST00000162749 A0A1W2PPI3 338 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HOXB4P17483 251 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HSPE1P61604 102 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 MOB3BQ86TA1 216 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 THNSL2Q86YJ6 484 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 PBDC1Q9BVG4 233 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 LPAR2Q9HBW0 351 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 VDAC2P45880 294 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 KRTAP10-9P60411 292 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HBG1P69891 147 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HBG2P69892 147 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 TPTE2P1Q5T6R2 138 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 LHFPL4Q7Z7J7 247 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 ZNF257Q9Y2Q1 563 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 OR51B2Q9Y5P1 312 aa15.86■□□□□ 0.13
TNFRSF1A-201ENST00000162749 SLC35B3Q9H1N7 401 aa15.85■□□□□ 0.13
TNFRSF1A-201ENST00000162749 A0A1W2PRD5 423 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 A0A1W2PRF3 423 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 A0A1W2PRM7 423 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 PMS2P5A8MQ11 134 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 TOX4O94842 621 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 IFNA5P01569 189 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 AKR1C8PQ5T2L2 129 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 OR8G2PQ6IF36 304 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 VSTM2AQ8TAG5 236 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 RSG1Q9BU20 258 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 LY86O95711 162 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 AKR1C3P42330 323 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 FLI1Q01543 452 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 TBX15Q96SF7 602 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HIPK2Q9H2X6 1198 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HEYLQ9NQ87 328 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HILPDAQ9Y5L2 63 aa15.84■□□□□ 0.13
TNFRSF1A-201ENST00000162749 C15orf62A8K5M9 175 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 SLC25A17O43808 307 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 USF1P22415 310 aaPredicted RBP15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 CEACAM3P40198 252 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 LGALS7P47929 136 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 HOXA1P49639 335 aaPredicted RBP15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 AKIRIN2Q53H80 203 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 TMEM167AQ8TBQ9 72 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 SAV1Q9H4B6 383 aaPredicted RBP15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 CREBBPQ92793 2442 aa15.83■□□□□ 0.13
TNFRSF1A-201ENST00000162749 RBFOX3A6NFN3 312 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TIMM23O14925 209 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OPN1MWP04001 364 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OPN1MW2P0DN77 364 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OPN1MW3P0DN78 364 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR13C7P0DN81 318 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RPL8P62917 257 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SLC38A11Q08AI6 406 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 AWAT1Q58HT5 328 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 LILRB2Q8N423 598 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CLCC1Q96S66 551 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 FKBP11Q9NYL4 201 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 KIAA1456Q9P272 454 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ABCA1O95477 2261 aa15.83■□□□□ 0.12
TNFRSF1A-201ENST00000162749 BTBD17A6NE02 478 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 COLCA2A8K830 154 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PAX6P26367 422 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PRCDQ00LT1 54 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SLC25A24Q6NUK1 477 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR5B3Q8NH48 314 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR4A5Q8NH83 315 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SFT2D1Q8WV19 159 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TEX50A0A1B0GTY4 177 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 DSCR9P59020 149 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 LRRC75BQ2VPJ9 315 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 DPPA3Q6W0C5 159 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RXFP4Q8TDU9 374 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 HINT2Q9BX68 163 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SMDT1Q9H4I9 107 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RPS10P5Q9NQ39 176 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TPSG1Q9NRR2 321 aa15.82■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CSPG4Q6UVK1 2322 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 C7orf77A4D0Y5 90 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 IFNA10P01566 189 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CNTFRP26992 372 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 HABP2Q14520 560 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 VMA21Q3ZAQ7 101 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR10P1Q8NGE3 313 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TMEM170AQ8WVE7 144 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CFHR4Q92496 578 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 C20orf24Q9BUV8 137 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 VSIRQ9H7M9 311 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ZNF430Q9H8G1 570 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SMCO4Q9NRQ5 59 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ITPR2Q14571 2701 aa15.81■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SNRNP70P08621 437 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SSX2Q16385 188 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms