RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SPINT2O43291 252 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 TNFSF13O75888 250 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 AGFG2O95081 481 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 CXorf1O96002 111 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 IER3P46695 156 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 FABP6P51161 128 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 ACP7Q6ZNF0 438 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 RAB1CQ92928 201 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 FAM103A1Q9BTL3 118 aaKnown RBP8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 GGTLC1Q9BX51 225 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 TP53TG3Q9ULZ0 132 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 IQCF6A8MYZ5 107 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 F2Z2F3 143 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 FCN1O00602 326 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 CDKN1AP38936 164 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 HINT1P49773 126 aaPredicted RBP8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 TIMM8AO60220 97 aaPredicted RBP8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 OPRK1P41145 380 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 GABRA6Q16445 453 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 RPL39P5Q59GN2 51 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 C11orf53Q8IXP5 236 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 HINT2Q9BX68 163 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 LAMA5O15230 3695 aa8.72□□□□□ -1.01
CX3CL1-201ENST00000006053 SNURFLB1AK76 121 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 C9orf172C9J069 976 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 FOXH1O75593 365 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 ACTL6BO94805 426 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 SP1P08047 785 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 DUTP33316 252 aaKnown RBP8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 YPEL3P61236 119 aaPredicted RBP8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 ERVK-16P61578 105 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 ODF1Q14990 250 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 KRTCAP3Q53RY4 240 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 TCTEX1D1Q8N7M0 179 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 CST9LQ9H4G1 147 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 HES4Q9HCC6 221 aa8.71□□□□□ -1.01
CX3CL1-201ENST00000006053 K7EN84 100 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 PROP1O75360 226 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 GCHFRP30047 84 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 ZNF596Q8TC21 504 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 LOXL4Q96JB6 756 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 IL36BQ9NZH7 164 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 MGAQ8IWI9 3026 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 DSPP15924 2871 aaKnown RBP8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 HCFC1P51610 2035 aa8.71□□□□□ -1.02
CX3CL1-201ENST00000006053 KLRC4-KLRK1H3BQV0 150 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 MPDU1O75352 247 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 LINC00310P59036 64 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 SLC35B1P78383 322 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 NHLH1Q02575 133 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 WDR82Q6UXN9 313 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 OR5AU1Q8NGC0 362 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 OR4P4Q8NGL7 312 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 Q8TCH9 128 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 C20orf144Q9BQM9 153 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 SPRR3Q9UBC9 169 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 DMXL1Q9Y485 3027 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 TRGV5A0A0B4J1U4 118 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 RANP62826 216 aaKnown RBP8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 PAFAH1B2P68402 229 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 HTD2P86397 168 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 DHRS13Q6UX07 377 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 Q6ZN92 141 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 CXXC4Q9H2H0 198 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 KLF13Q9Y2Y9 288 aaPredicted RBP8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 GFRA3O60609 400 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 KRTDAPP60985 99 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 CNEP1R1Q8N9A8 125 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 UHRF2Q96PU4 802 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 KMT2EQ8IZD2 1858 aa8.7□□□□□ -1.02
CX3CL1-201ENST00000006053 TRIP6Q15654 476 aaKnown RBP8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 SMIM21Q3B7S5 101 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 ZNF718Q3SXZ3 478 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 RNFT1Q5M7Z0 435 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 MMD2Q8IY49 270 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 STPG3Q8N7X2 389 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 LRRC29Q8WV35 223 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 S1PR3Q99500 378 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 TXNDC17Q9BRA2 123 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 NPVFQ9HCQ7 196 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 TMEM140Q9NV12 185 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 TCF19Q9Y242 345 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 CGAP01215 116 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 VDAC2P45880 294 aaPredicted RBP8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 TCL1AP56279 114 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 EFNB3Q15768 340 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 RPEL1Q2QD12 228 aa8.69□□□□□ -1.02
CX3CL1-201ENST00000006053 PRR27Q6MZM9 219 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms