RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ercc1P07903 298 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Thsd4Q3UTY6 1018 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 A3galt2Q3V1N9 370 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gpr135Q7TQP2 457 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr193Q7TS43 309 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Henmt1Q8CAE2 395 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cd300eQ8K249 196 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Myct1Q8R411 188 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr509Q8VF20 321 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr469Q8VF66 314 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1270Q8VGP3 304 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Klf7Q99JB0 301 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mapk7Q9WVS8 806 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Dopey2Q3UHQ6 2295 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ighv5-15A0A0A6YWC7 117 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hist1h2bmP10854 126 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Nkx2-1P50220 372 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Col9a1Q05722 921 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm5127Q3UQH6 212 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hist1h2bhQ64478 126 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hist2h2bbQ64525 126 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Megf10Q6DIB5 1147 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1155Q8VFR3 314 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gng12Q9DAS9 72 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp108E9Q8I5 642 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr62L7MU75 315 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm20939L7N243 523 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 MscO88940 201 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 SellP18337 372 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rps2P25444 293 aaKnown RBP9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ccl7Q03366 97 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm1527Q3V0P3 650 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Fa2hQ5MPP0 372 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 RydenQ8CAK3 290 aaKnown RBP9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mcts2Q9CQ21 181 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr951Q9EQ94 314 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Unc119Q9Z2R6 240 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 Wnk1P83741 2377 aa9.42□□□□□ -0.9
Msh3-201ENSMUST00000022220 SiglechB7ZMQ6 332 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm4744D3Z3S5 154 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm43191F6YIH5 235 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 P01634 136 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 P01798 113 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 H2-DMaP28078 261 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tnfsf10P50592 291 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 PigcQ9CXR4 297 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cst6Q9D1B1 149 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 CutcQ9D8X1 272 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Syt13Q9EQT6 426 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tcf20Q9EPQ8 1987 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Awat1A2ADU9 328 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rps16P14131 146 aaKnown RBP9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 P2ry1P49650 373 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Nhlh2Q64221 135 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vstm2lQ6PDS0 220 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1212Q7TR08 311 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 IqcjQ8BPW0 110 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 EogtQ8BYW9 527 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr493Q8VEW5 314 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Eva1aQ91WM6 156 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 TsfmQ9CZR8 324 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Plekha2Q9ERS5 425 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Fxyd1Q9Z239 92 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rgs11Q9Z2H1 443 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm5890A0A140LI04 305 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Samt3A2ARK7 233 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Wdfy1E9Q4P1 410 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm9376G3UW68 176 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Itgb2P11835 771 aaKnown RBP9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cox5aP12787 146 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Fcer1gP20491 86 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tnfsf8P32972 239 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 PtgfrP43117 366 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Prrc1Q3UPH1 443 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mef2cQ8CFN5 474 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr916Q8VG53 310 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr126Q8VGF0 319 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 SmagpQ99KC7 97 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Abhd12Q99LR1 398 aaKnown RBP9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lamp5Q9D387 280 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mlf1Q9QWV4 267 aa9.41□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ifna2P01573 190 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Slc25a4P48962 298 aaKnown RBP9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lsm6P62313 80 aaKnown RBP9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tpt1P63028 172 aaKnown RBP9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rbp2Q08652 134 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Patz1Q5NBY9 687 aaKnown RBP9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmprss13Q5U405 543 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tff3Q62395 81 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Znf511Q6P0X2 227 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Q80UB0 333 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 C1saQ8CG14 688 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmem230Q8CIB6 120 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1239Q8VGM8 305 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rab32Q9CZE3 223 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Foxj2Q9ES18 565 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr154Q9QY00 318 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 TncQ80YX1 2110 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp764E9QAP1 431 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms