RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PSMB3P49720 205 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 ELOBQ15370 118 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 TMEM30BQ3MIR4 351 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 SLC24A4Q8NFF2 622 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 FAM90A27PA6NNH2 459 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 CYB5BO43169 146 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 CA2P00918 260 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 NPY1RP25929 384 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 GRNP28799 593 aaKnown RBP13.85□□□□□ -0.19
PHGDH-229ENST00000641891 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 ARSJQ5FYB0 599 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-229ENST00000641891 MIC13Q5XKP0 118 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 ZNF833PQ6ZTB9 187 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 LINC01560Q8TB33 94 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
PHGDH-229ENST00000641891 MALSU1Q96EH3 234 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 GGTLC1Q9BX51 225 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 NGBQ9NPG2 151 aa13.85□□□□□ -0.19
PHGDH-229ENST00000641891 TGIF2-C20orf24A0A0A6YYL0 155 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-229ENST00000641891 DVL1O14640 695 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 NDUFB3O43676 98 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 PAGE4O60829 102 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 COL8A2P25067 703 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 RTL8BQ17RB0 113 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 SSX8Q7RTT4 187 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 PKDREJQ9NTG1 2253 aa13.84□□□□□ -0.19
PHGDH-229ENST00000641891 VSTM5A8MXK1 200 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 UPK2O00526 184 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 IL6RP08887 468 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-229ENST00000641891 DIAPH2-AS1Q14236 149 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 OR4F5Q8NH21 305 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 OR4F4Q96R69 305 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 SSX3Q99909 188 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 SMIM7Q9BQ49 75 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 GGACTQ9BVM4 153 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 PXMP4Q9Y6I8 212 aa13.83□□□□□ -0.19
PHGDH-229ENST00000641891 SEC14L6B5MCN3 397 aa13.83□□□□□ -0.2
PHGDH-229ENST00000641891 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-229ENST00000641891 LOXP28300 417 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-229ENST00000641891 OPRK1P41145 380 aa13.83□□□□□ -0.2
PHGDH-229ENST00000641891 RPS10P46783 165 aaKnown RBP13.83□□□□□ -0.2
PHGDH-229ENST00000641891 FAM122AQ96E09 287 aa13.83□□□□□ -0.2
PHGDH-229ENST00000641891 MANBALQ9NQG1 85 aa13.83□□□□□ -0.2
PHGDH-229ENST00000641891 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
PHGDH-229ENST00000641891 J3QR06 171 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 MPDU1O75352 247 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 PNRC1Q12796 327 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-229ENST00000641891 LRRC10Q5BKY1 277 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 PRNDQ9UKY0 176 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 B4DEV8 164 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 S100A6P06703 90 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 CD3EP07766 207 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 PARLQ9H300 379 aa13.82□□□□□ -0.2
PHGDH-229ENST00000641891 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
PHGDH-229ENST00000641891 RELNP78509 3460 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 IGHV1-69-2A0A0G2JMI3 117 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 LYNX1G3V0Z9 82 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 H0YJW9 148 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 LYNX1P0DP58 116 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 APOBEC3AP31941 199 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-229ENST00000641891 UBE2G2P60604 165 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 ADIRFQ15847 76 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
PHGDH-229ENST00000641891 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 SIAH2O43255 324 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 KBTBD11O94819 623 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 PRCDQ00LT1 54 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 NHLH1Q02575 133 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 HARBI1Q96MB7 349 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
PHGDH-229ENST00000641891 ARFGEF3Q5TH69 2177 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 CXorf65A6NEN9 183 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 CHRNB4P30926 498 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 CDSNQ15517 529 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 CYP2G1PQ6ZSU1 146 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
PHGDH-229ENST00000641891 C11orf94C9JXX5 98 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 TMEM250H0YL14 139 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 APOA2P02652 100 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 NPPCP23582 126 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 CA7P43166 264 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 ATP5G3P48201 142 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 DLX1P56177 255 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 DLX6P56179 175 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 TMEM241Q24JQ0 296 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 OR10W1Q8NGF6 305 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 ZNF257Q9Y2Q1 563 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
PHGDH-229ENST00000641891 IGFBP2P18065 325 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms