RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GPR183P32249 361 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 SDC2P34741 201 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 MAS1LP35410 378 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 FAM209BQ5JX69 171 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-213ENST00000641272 CTRB2Q6GPI1 263 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 SPAG16Q8N0X2 631 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 SPARTQ8N0X7 666 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 TECRQ9NZ01 308 aaKnown RBP12.54□□□□□ -0.4
PHGDH-213ENST00000641272 RAB26Q9ULW5 256 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 SSR3Q9UNL2 185 aa12.54□□□□□ -0.4
PHGDH-213ENST00000641272 IGLV11-55A0A075B6I3 123 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 MEIS3P1A6NDR6 274 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 LGALS9O00182 355 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 SULT1C2O00338 296 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 HRASP01112 189 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 PPYP01298 95 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 UNQ9165/PRO28630Q6UXU0 137 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 TMEM17Q86X19 198 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 UXS1Q8NBZ7 420 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
PHGDH-213ENST00000641272 LOC100506127A0A0U1RQW1 187 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 A8MWP6 167 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 DHFRP00374 187 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 CRYGCP07315 174 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 TM4SF20Q53R12 229 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 IDNKQ5T6J7 187 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 GPHB5Q86YW7 130 aa12.52□□□□□ -0.41
PHGDH-213ENST00000641272 S1PR2O95136 353 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 OR2B8PP59922 312 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 TPRA1Q86W33 373 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 FCGR1BQ92637 280 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
PHGDH-213ENST00000641272 IGLC7A0M8Q6 106 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 HIST1H1BP16401 226 aaKnown RBP12.5□□□□□ -0.41
PHGDH-213ENST00000641272 CATR1Q13166 79 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 PMS2P11Q13670 270 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 ZNF773Q6PK81 442 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 ZNF818PQ6ZRF7 136 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 IL17DQ8TAD2 202 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 GGTLC1Q9BX51 225 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
PHGDH-213ENST00000641272 IGHV3-21A0A0B4J1V1 117 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 MRPS14O60783 128 aaKnown RBP12.49□□□□□ -0.41
PHGDH-213ENST00000641272 CLEC3BP05452 202 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 AADACL3Q5VUY0 350 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 ZNF502Q8TBZ5 544 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 UBQLN2Q9UHD9 624 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
PHGDH-213ENST00000641272 IGHV3OR16-8A0A075B7F1 116 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 TRBV7-1A0A0A6YYK4 115 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 UPK2O00526 184 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 TAS2R31P59538 309 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 NEDD8Q15843 81 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 CXorf58Q96LI9 332 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 COMMD5Q9GZQ3 224 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
PHGDH-213ENST00000641272 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-213ENST00000641272 OR2T8A6NH00 312 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 RBFOX2O43251 390 aaKnown RBP eCLIP12.47□□□□□ -0.417e-8■■□□□ 12.4
PHGDH-213ENST00000641272 HPRT1P00492 218 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 RLN1P04808 185 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 NQO2P16083 231 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 TGFBR1P36897 503 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 HERV-K104P61576 105 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 MSMO1Q15800 293 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 PLET1Q6UQ28 207 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
PHGDH-213ENST00000641272 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
PHGDH-213ENST00000641272 IFT46Q9NQC8 304 aa12.47□□□□□ -0.41
PHGDH-213ENST00000641272 ATP6V1G2O95670 118 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 KLK9Q2XQG4 91 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 TMEM190Q8WZ59 177 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
PHGDH-213ENST00000641272 CXorf65A6NEN9 183 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 TGOLN2O43493 480 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 ZNF207O43670 478 aaKnown RBP12.45□□□□□ -0.42
PHGDH-213ENST00000641272 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 ERVK-16P61578 105 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 EWSR1Q01844 656 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHGDH-213ENST00000641272 WT1-ASQ06250 92 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms