RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SLC35D1Q9NTN3 355 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 TLN1Q9Y490 2541 aaKnown RBP13.96□□□□□ -0.18
PHGDH-211ENST00000641213 C5orf52A6NGY3 159 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 OPRK1P41145 380 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 RTL8BQ17RB0 113 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 ZNF833PQ6ZTB9 187 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 C1QL4Q86Z23 238 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 MGST2Q99735 147 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 MSRB2Q9Y3D2 182 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 OR51B2Q9Y5P1 312 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 KALRNO60229 2985 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 SRRM4A7MD48 611 aaKnown RBP13.95□□□□□ -0.18
PHGDH-211ENST00000641213 SOX15O60248 233 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 YIF1AO95070 293 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 CXCL1P09341 107 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 SLC24A4Q8NFF2 622 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 URGCP-MRPS24S4R325 110 aa13.95□□□□□ -0.18
PHGDH-211ENST00000641213 TMEM250H0YL14 139 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 UPK2O00526 184 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 S100A6P06703 90 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 NPY1RP25929 384 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 IQCF2Q8IXL9 164 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 C1orf159Q96HA4 380 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 SMIM7Q9BQ49 75 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 DYNLRB1Q9NP97 96 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 ENY2Q9NPA8 101 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 PRNDQ9UKY0 176 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 ADGRG4Q8IZF6 3080 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 NDUFB3O43676 98 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 PAGE4O60829 102 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 CA2P00918 260 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 RPS10P46783 165 aaKnown RBP13.94□□□□□ -0.18
PHGDH-211ENST00000641213 ARSJQ5FYB0 599 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-211ENST00000641213 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 H1FXQ92522 213 aaKnown RBP13.94□□□□□ -0.18
PHGDH-211ENST00000641213 RAB1CQ92928 201 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 GGTLC1Q9BX51 225 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 NPVFQ9HCQ7 196 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
PHGDH-211ENST00000641213 LSM4Q9Y4Z0 139 aaKnown RBP13.94□□□□□ -0.18
PHGDH-211ENST00000641213 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 NDUFS6O75380 124 aaKnown RBP13.93□□□□□ -0.18
PHGDH-211ENST00000641213 ZNF674Q2M3X9 581 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 LRRC10Q5BKY1 277 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 PATZ1Q9HBE1 687 aaKnown RBP13.93□□□□□ -0.18
PHGDH-211ENST00000641213 CTSZQ9UBR2 303 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 ZNF257Q9Y2Q1 563 aa13.93□□□□□ -0.18
PHGDH-211ENST00000641213 J3QR06 171 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 UBE2CO00762 179 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 KBTBD11O94819 623 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 MIC13Q5XKP0 118 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 CYP2G1PQ6ZSU1 146 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 RPUSD4Q96CM3 377 aaKnown RBP13.92□□□□□ -0.18
PHGDH-211ENST00000641213 MRPL20Q9BYC9 149 aaKnown RBP13.92□□□□□ -0.18
PHGDH-211ENST00000641213 PXMP4Q9Y6I8 212 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 A0A1W2PPV4 95 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 DVL1O14640 695 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-211ENST00000641213 PRCDQ00LT1 54 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 TMEM241Q24JQ0 296 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 TMEM249Q2WGJ8 235 aa13.92□□□□□ -0.18
PHGDH-211ENST00000641213 CLDN34H7C241 214 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 SAA1P0DJI8 122 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-211ENST00000641213 RND2P52198 227 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 PARLQ9H300 379 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 BET1LQ9NYM9 111 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 TEX50A0A1B0GTY4 177 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 OPN1MWP04001 364 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 OPN1MW2P0DN77 364 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 OPN1MW3P0DN78 364 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 LOXP28300 417 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-211ENST00000641213 TEPPQ6URK8 271 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 PLEKHA3Q9HB20 300 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 METTL1Q9UBP6 276 aaKnown RBP13.91□□□□□ -0.18
PHGDH-211ENST00000641213 KAAG1Q9UBP8 84 aa13.91□□□□□ -0.18
PHGDH-211ENST00000641213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-211ENST00000641213 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 H0YJW9 148 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 APOA2P02652 100 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 CD3EP07766 207 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 EFNB3Q15768 340 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 ADIRFQ15847 76 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 OSR1Q8TAX0 266 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-211ENST00000641213 SSMEM1Q8WWF3 244 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 NEIL1Q96FI4 390 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-211ENST00000641213 SSX3Q99909 188 aa13.9□□□□□ -0.18
PHGDH-211ENST00000641213 IGHV1-69-2A0A0G2JMI3 117 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 C11orf94C9JXX5 98 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 PLAUP00749 431 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 DLX6P56179 175 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 FABP9Q0Z7S8 132 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 OR5AN1Q8NGI8 311 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 ZNF596Q8TC21 504 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 CTDSP1Q9GZU7 261 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 FKBP11Q9NYL4 201 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 B9A039 149 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms