RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 PAQR9Q6ZVX9 377 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 COQ2Q96H96 371 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 MPTX1A8MV57 137 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 ST6GALNAC2Q9UJ37 374 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 DOCK3Q8IZD9 2030 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 PRTN3P24158 256 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 LINC01587Q99440 93 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 TLNRD1Q9H1K6 362 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 IFNL4K9M1U5 179 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 MIXL1Q9H2W2 232 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 PRRT4C9JH25 899 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 EDIL3O43854 480 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 CIARTQ8N365 385 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-228ENST00000638155 FAM57AQ8TBR7 257 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE3A-228ENST00000638155 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 ST20Q9HBF5 79 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 PDFQ9HBH1 243 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 FDCSPQ8NFU4 85 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 HMGCLL1Q8TB92 370 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 H3BTX0 84 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 ERVK11-1P61568 191 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 HTN3P15516 51 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 GCHFRP30047 84 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 PCSK4Q6UW60 755 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-228ENST00000638155 WDYHV1Q96HA8 205 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
UBE3A-228ENST00000638155 DYSFO75923 2080 aa11.28□□□□□ -0.6
UBE3A-228ENST00000638155 EGR1P18146 543 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 SIGLEC14Q08ET2 396 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.6
UBE3A-228ENST00000638155 KLF12Q9Y4X4 402 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 CDC42EP2O14613 210 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 CD28P10747 220 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 MAGEA5P43359 124 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 LINC00158P58513 81 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 DCAF12L2Q5VW00 463 aa11.27□□□□□ -0.6
UBE3A-228ENST00000638155 DLX4Q92988 240 aaPredicted RBP11.27□□□□□ -0.6
UBE3A-228ENST00000638155 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 TMEM174Q8WUU8 243 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 JMJD8Q96S16 334 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.61
UBE3A-228ENST00000638155 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 CEACAM5P06731 702 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 ZNF660Q6AZW8 331 aaPredicted RBP11.27□□□□□ -0.61
UBE3A-228ENST00000638155 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 CCL13Q99616 98 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 SIRT4Q9Y6E7 314 aaPredicted RBP11.27□□□□□ -0.61
UBE3A-228ENST00000638155 RGPD3A6NKT7 1758 aaPredicted RBP11.27□□□□□ -0.61
UBE3A-228ENST00000638155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.27□□□□□ -0.613e-9■■■■■ 30.4
UBE3A-228ENST00000638155 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.61
UBE3A-228ENST00000638155 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
UBE3A-228ENST00000638155 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 OR9G4Q8NGQ1 327 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 MGST3O14880 152 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 CD5LO43866 347 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 GFRA3O60609 400 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 HSD52Q0P140 79 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 WNT2BQ93097 391 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 TNFRSF12AQ9NP84 129 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 IGKCP01834 107 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 TRBV5-4A0A0C4DH59 114 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 UCP3P55916 312 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 ICAM4Q14773 271 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
UBE3A-228ENST00000638155 KCNE1BA0A087WTH5 132 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 IL11P20809 199 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 LINC00587B1AMM8 73 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
UBE3A-228ENST00000638155 PTP4A3O75365 173 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 FGF12P61328 243 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 ZNF124Q15973 351 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 HMGA2P52926 109 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 INS-IGF2F8WCM5 200 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 INSP01308 110 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 FXYD1O00168 92 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
UBE3A-228ENST00000638155 LOXL4Q96JB6 756 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 CACNA1EQ15878 2313 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 TRAV9-2A0A087WT02 112 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms