RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 NEURL2Q9BR09 285 aa15.17■□□□□ 0.02
CLN6-222ENST00000637667 PLEKHA3Q9HB20 300 aa15.17■□□□□ 0.02
CLN6-222ENST00000637667 SLC2A8Q9NY64 477 aa15.17■□□□□ 0.02
CLN6-222ENST00000637667 TECRQ9NZ01 308 aaKnown RBP15.17■□□□□ 0.02
CLN6-222ENST00000637667 CGB1A6NKQ9 187 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 XRCC3O43542 346 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 TPPPO94811 219 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 HPRT1P00492 218 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 REG1AP05451 166 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 DEFA4P12838 97 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 NQO2P16083 231 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 EDN2P20800 178 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 OR2B8PP59922 312 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 POU2AF1Q16633 256 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 ZFAND6Q6FIF0 208 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 ZNF818PQ6ZRF7 136 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 TMEM17Q86X19 198 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 CROCCP3Q8IVE0 287 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 OR51H1Q8NH63 302 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 IFT46Q9NQC8 304 aa15.16■□□□□ 0.02
CLN6-222ENST00000637667 IGLV11-55A0A075B6I3 123 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 TRAV3A0A0B4J244 114 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 UPK2O00526 184 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 IFNA6P05013 189 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 TGFBR1P36897 503 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 HERV-K104P61576 105 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 GUCA2BQ16661 112 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 AADACL3Q5VUY0 350 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 CD300LFQ8TDQ1 290 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 S100A16Q96FQ6 103 aaKnown RBP15.15■□□□□ 0.02
CLN6-222ENST00000637667 ZC4H2Q9NQZ6 224 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 EHFQ9NZC4 300 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 CEPT1Q9Y6K0 416 aa15.15■□□□□ 0.02
CLN6-222ENST00000637667 IGLC7A0M8Q6 106 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 CD7P09564 240 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 FAM106AQ4KMX7 169 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 UBE2NLQ5JXB2 153 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
CLN6-222ENST00000637667 COMMD5Q9GZQ3 224 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 PLEKHA2Q9HB19 425 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 TMEM140Q9NV12 185 aa15.14■□□□□ 0.01
CLN6-222ENST00000637667 SACSQ9NZJ4 4579 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 TRBV7-1A0A0A6YYK4 115 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 TMEM213A2RRL7 107 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 MFSD2BA6NFX1 497 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 S1PR2O95136 353 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 CBLN1P23435 193 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 GNRHRP30968 328 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 DMBX1Q8NFW5 382 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 CACNG8Q8WXS5 425 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 BORCS5Q969J3 196 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 WDR89Q96FK6 387 aaPredicted RBP15.13■□□□□ 0.01
CLN6-222ENST00000637667 CXorf58Q96LI9 332 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 SRSF8Q9BRL6 282 aaKnown RBP15.13■□□□□ 0.01
CLN6-222ENST00000637667 COMMD9Q9P000 198 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 ANAPC10Q9UM13 185 aa15.13■□□□□ 0.01
CLN6-222ENST00000637667 ZNF320A2RRD8 509 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 A8MWP6 167 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 FGF2P09038 288 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 RPS19P39019 145 aaKnown RBP15.12■□□□□ 0.01
CLN6-222ENST00000637667 RFX2P48378 723 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 TAS2R20P59543 309 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 TMEM69Q5SWH9 247 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 DHRS11Q6UWP2 260 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 SAMD12Q8N8I0 201 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 MOB3AQ96BX8 217 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 YIPF6Q96EC8 236 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 QTRT1Q9BXR0 403 aaKnown RBP15.12■□□□□ 0.01
CLN6-222ENST00000637667 WFDC10AQ9H1F0 79 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 HIPK2Q9H2X6 1198 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 RETNQ9HD89 108 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 RYR2Q92736 4967 aa15.12■□□□□ 0.01
CLN6-222ENST00000637667 OR11H12B2RN74 326 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 CLEC3BP05452 202 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 RPA2P15927 270 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 ERVK-16P61578 105 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 LSM3P62310 102 aaKnown RBP15.11■□□□□ 0.01
CLN6-222ENST00000637667 ZNF57Q68EA5 555 aaPredicted RBP15.11■□□□□ 0.01
CLN6-222ENST00000637667 ZNF502Q8TBZ5 544 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 ZNF2Q9BSG1 426 aaPredicted RBP15.11■□□□□ 0.01
CLN6-222ENST00000637667 SRD5A3Q9H8P0 318 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 SELENOKQ9Y6D0 94 aa15.11■□□□□ 0.01
CLN6-222ENST00000637667 LCE6AA0A183 80 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 RBMY1BA6NDE4 496 aaKnown RBP15.1■□□□□ 0.01
CLN6-222ENST00000637667 RBMY1EA6NEQ0 496 aaKnown RBP15.1■□□□□ 0.01
CLN6-222ENST00000637667 PMP2P02689 132 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 RBMY1DP0C7P1 496 aaKnown RBP15.1■□□□□ 0.01
CLN6-222ENST00000637667 NAT1P18440 290 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 TAS2R46P59540 309 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 THOC7Q6I9Y2 204 aaKnown RBP15.1■□□□□ 0.01
CLN6-222ENST00000637667 TMEM61Q8N0U2 210 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 UXS1Q8NBZ7 420 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 OR10W1Q8NGF6 305 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 OR5H2Q8NGV7 314 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 GAR1Q9NY12 217 aaKnown RBP15.1■□□□□ 0.01
CLN6-222ENST00000637667 THYN1Q9P016 225 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 MLXQ9UH92 298 aa15.1■□□□□ 0.01
CLN6-222ENST00000637667 A0A087WXM4 84 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms