RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 AREGP15514 252 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 RPA2P15927 270 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 F2RP25116 425 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 PSMB6P28072 239 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 POU2AF1Q16633 256 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 C15orf32Q32M92 178 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 RNASE12Q5GAN4 147 aaKnown RBP10.57□□□□□ -0.72
PNKP-228ENST00000637325 FAM209BQ5JX69 171 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 C11orf87Q6NUJ2 197 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 HAPLN4Q86UW8 402 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 DGCR14Q96DF8 476 aaKnown RBP10.57□□□□□ -0.72
PNKP-228ENST00000637325 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
PNKP-228ENST00000637325 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 IFNA6P05013 189 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 REG1AP05451 166 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
PNKP-228ENST00000637325 LPAR6P43657 344 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 ALDH3B2P48448 385 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 OR2B8PP59922 312 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 PHLDA2Q53GA4 152 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 C15orf40Q8WUR7 153 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 ASCL2Q99929 193 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 PEMTQ9UBM1 199 aa10.56□□□□□ -0.72
PNKP-228ENST00000637325 A0A1B0GW64 132 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 RGS5O15539 181 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 SNAPC5O75971 98 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 IGLV1-51P01701 117 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 CRYGCP07315 174 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 CTRB1P17538 263 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 CLVS1Q8IUQ0 354 aaPredicted RBP10.55□□□□□ -0.72
PNKP-228ENST00000637325 FCAMRQ8WWV6 532 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 EEF1AKMT3Q96AZ1 226 aa10.55□□□□□ -0.72
PNKP-228ENST00000637325 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 H0Y980 276 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 M0QYG6 137 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 BMPR1BO00238 502 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 NDUFB8O95169 186 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 KRASP01116 189 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 IGHV3-23P01764 117 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 G6PCP35575 357 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 SLC38A6Q8IZM9 456 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 OR1L8Q8NGR8 309 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 OR52I2Q8NH67 350 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
PNKP-228ENST00000637325 HINT2Q9BX68 163 aa10.54□□□□□ -0.72
PNKP-228ENST00000637325 QTRT1Q9BXR0 403 aaKnown RBP10.54□□□□□ -0.72
PNKP-228ENST00000637325 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 PPP5D1E7EU14 171 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 CYB5BO43169 146 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 NOL3O60936 208 aaKnown RBP10.53□□□□□ -0.72
PNKP-228ENST00000637325 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
PNKP-228ENST00000637325 TPPPO94811 219 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 CSN3P07498 182 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 FGF2P09038 288 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 PGAM2P15259 253 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 UCP3P55916 312 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 SPCS2Q15005 226 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
PNKP-228ENST00000637325 THOC7Q6I9Y2 204 aaKnown RBP10.53□□□□□ -0.72
PNKP-228ENST00000637325 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 IL34Q6ZMJ4 242 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 RAB2BQ8WUD1 216 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 THYN1Q9P016 225 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 KLK11Q9UBX7 282 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 OR51B2Q9Y5P1 312 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 S4R3C0 116 aa10.53□□□□□ -0.72
PNKP-228ENST00000637325 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 ARL3P36405 182 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 ZNF585BQ52M93 769 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.73
PNKP-228ENST00000637325 DYNLRB2Q8TF09 96 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 CXorf58Q96LI9 332 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 ABHD1Q96SE0 405 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 FKBP11Q9NYL4 201 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 MTFP1Q9UDX5 166 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 PRNDQ9UKY0 176 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 U3KQK5 164 aa10.52□□□□□ -0.73
PNKP-228ENST00000637325 TRBV7-1A0A0A6YYK4 115 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 CTDSP2O14595 271 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 OR2C1O95371 312 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 HLA-AP01891 365 aaKnown RBP10.51□□□□□ -0.73
PNKP-228ENST00000637325 CD3DP04234 171 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 OR13C7P0DN81 318 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 TBPP20226 339 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
PNKP-228ENST00000637325 TMBIM6P55061 237 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 TAS2R19P59542 299 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms