RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SH3BGRL2Q9UJC5 107 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 OR51B2Q9Y5P1 312 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 ICE1Q9Y2F5 2266 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 F6UZH7 168 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 TMEM178BH3BS89 294 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 UPK2O00526 184 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
CLN8-212ENST00000637083 S100PP25815 95 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
CLN8-212ENST00000637083 ADIRFQ15847 76 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 FAM71F2Q6NXP2 309 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 C1orf229Q6ZS94 237 aaPredicted RBP9.95□□□□□ -0.82
CLN8-212ENST00000637083 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 SNRNP40Q96DI7 357 aaKnown RBP9.95□□□□□ -0.82
CLN8-212ENST00000637083 FAM210BQ96KR6 192 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 PLEKHA3Q9HB20 300 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 BET1LQ9NYM9 111 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 URGCP-MRPS24S4R325 110 aa9.95□□□□□ -0.82
CLN8-212ENST00000637083 J3QR06 171 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 PAGE4O60829 102 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 EIF3GO75821 320 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLN8-212ENST00000637083 CXorf1O96002 111 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 IL6RP08887 468 aaPredicted RBP9.94□□□□□ -0.82
CLN8-212ENST00000637083 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 CASP6P55212 293 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 ERVFRD-1P60508 538 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 PRCDQ00LT1 54 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 Q8N7P7 452 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 C8orf31Q8N9H6 132 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 OR5B3Q8NH48 314 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 ZCCHC14Q8WYQ9 949 aaKnown RBP9.94□□□□□ -0.82
CLN8-212ENST00000637083 RPUSD4Q96CM3 377 aaKnown RBP9.94□□□□□ -0.82
CLN8-212ENST00000637083 VKORC1Q9BQB6 163 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 PARLQ9H300 379 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 DYNLRB1Q9NP97 96 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 TMEM106BQ9NUM4 274 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 USF3Q68DE3 2245 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 C11orf94C9JXX5 98 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 MT-CO2P00403 227 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 ZNF343Q6P1L6 599 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 RNASE6Q93091 150 aaKnown RBP9.94□□□□□ -0.82
CLN8-212ENST00000637083 OR5B12Q96R08 314 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 MGST2Q99735 147 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
CLN8-212ENST00000637083 LSM4Q9Y4Z0 139 aaKnown RBP9.94□□□□□ -0.82
CLN8-212ENST00000637083 ADGRG4Q8IZF6 3080 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 PLCE1Q9P212 2302 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 CXCL1P09341 107 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
CLN8-212ENST00000637083 RHOBP62745 196 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 S100A12P80511 92 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 NCMAPQ5T1S8 102 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 VSTM2AQ8TAG5 236 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 TMEM186Q96B77 213 aa9.93□□□□□ -0.82
CLN8-212ENST00000637083 TGIF2-C20orf24A0A0A6YYL0 155 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 CA2P00918 260 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 STAG3L2P0CL84 134 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 STAG3L3P0CL85 134 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 B2MP61769 119 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 RPL23P62829 140 aaKnown RBP9.92□□□□□ -0.82
CLN8-212ENST00000637083 LINC00311Q8N616 119 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 CCL17Q92583 94 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 BTF3L4Q96K17 158 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 WFIKKN1Q96NZ8 548 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 TMEM204Q9BSN7 226 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 HINT2Q9BX68 163 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 B9A039 149 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 H7BYZ3 331 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 ATXN7O15265 892 aaPredicted RBP9.92□□□□□ -0.82
CLN8-212ENST00000637083 MMP23AO75900 390 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 YIF1AO95070 293 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 APOBEC3AP31941 199 aaPredicted RBP9.92□□□□□ -0.82
CLN8-212ENST00000637083 EFNB3Q15768 340 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 UTF1Q5T230 341 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 MIC13Q5XKP0 118 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 TMEM170AQ8WVE7 144 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 H1FXQ92522 213 aaKnown RBP9.92□□□□□ -0.82
CLN8-212ENST00000637083 DCAF16Q9NXF7 216 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 DYSFO75923 2080 aa9.92□□□□□ -0.82
CLN8-212ENST00000637083 TANC2Q9HCD6 1990 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 CLN5O75503 358 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 CD3EP07766 207 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 HOXA5P20719 270 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 UCNP55089 124 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 TMEM177Q53S58 311 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 CST9LP1Q5W188 147 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 TMEM200BQ69YZ2 307 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 SPNS3Q6ZMD2 512 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 PDPNQ86YL7 162 aa9.91□□□□□ -0.82
CLN8-212ENST00000637083 TGIF2LYQ8IUE0 185 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms