RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	ATP6V1F	Q16864	119 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	ACP7	Q6ZNF0	438 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NPIPB11	E5RHQ5	1161 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	IGFBP2	P18065	325 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CRYBB3	P26998	211 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033		Q6ZVH6	145 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	MIR17HG	Q75NE6	70 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	BTF3L4	Q96K17	158 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NEU1	Q99519	415 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	WDR83OS	Q9Y284	106 aa		10.8	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TET2	Q6N021	2002 aa	Predicted RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	RAB29	O14966	203 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CYC1	P08574	325 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NTF3	P20783	257 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	GGTLC1	Q9BX51	225 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NBAS	A2RRP1	2371 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033		P0C879	139 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	ZNF766	Q5HY98	468 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	COA6	Q5JTJ3	125 aa	Known RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033		Q8IYB0	196 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	LINC00479	Q96M42	142 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	WNT10A	Q9GZT5	417 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	SPINT2	O43291	252 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	DUT	P33316	252 aa	Known RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	PDLIM4	P50479	330 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	LINC00310	P59036	64 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	PSG5	Q15238	335 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	PQLC2	Q6ZP29	291 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	SNRNP40	Q96DI7	357 aa	Known RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CIB3	Q96Q77	187 aa	Predicted RBP	10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TMEM140	Q9NV12	185 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NAT8B	Q9UHF3	227 aa		10.79	□□□□□ -0.68
CHRNA7-223	ENST00000637033	PDE6D	O43924	150 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	OR7C2	O60412	319 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CD46	P15529	392 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	HOXC12	P31275	282 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CCL11	P51671	97 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	HTD2	P86397	168 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	STPG3	Q8N7X2	389 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	ST6GALNAC3	Q8NDV1	305 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	UHRF2	Q96PU4	802 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	KLRC4-KLRK1	H3BQV0	150 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	SPRY3	O43610	288 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	IL6R	P08887	468 aa	Predicted RBP	10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	PRDX2	P32119	198 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	CCKAR	P32238	428 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	RND1	Q92730	232 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TAAR6	Q96RI8	345 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	DIRC2	Q96SL1	478 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TANC2	Q9HCD6	1990 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	NAV3	Q8IVL0	2385 aa		10.78	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TNFSF15	O95150	251 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	VENTX	O95231	258 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	OR10J1	P30954	320 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TNFSF10	P50591	281 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TDGF1P3	P51864	188 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	EFNB3	Q15768	340 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	DBX2	Q6ZNG2	339 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TMEM106B	Q9NUM4	274 aa		10.77	□□□□□ -0.68
CHRNA7-223	ENST00000637033	TECTA	O75443	2155 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	ERVK-16	P61578	105 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	C1orf194	Q5T5A4	169 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TMEM144	Q7Z5S9	345 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	LYG1	Q8N1E2	194 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	RCHY1	Q96PM5	261 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	S1PR3	Q99500	378 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TUBG2	Q9NRH3	451 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	GFRA3	O60609	400 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	PAX1	P15863	534 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	GCHFR	P30047	84 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	MAJIN	Q3KP22	176 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TMEM164	Q5U3C3	297 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	SLC35E4	Q6ICL7	350 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	ERAS	Q7Z444	233 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	KCNIP2	Q9NS61	270 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TCF19	Q9Y242	345 aa		10.77	□□□□□ -0.69
CHRNA7-223	ENST00000637033	PLAU	P00749	431 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	APELA	P0DMC3	54 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	SUMO1	P63165	101 aa	Known RBP	10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	PRR27	Q6MZM9	219 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	MMD2	Q8IY49	270 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	C1orf159	Q96HA4	380 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	CA2	P00918	260 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	CECR9	P0C854	216 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	VAMP8	Q9BV40	100 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TP73-AS1	Q9UF72	201 aa		10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.76	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TRAV5	A0A0B4J249	113 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	PIGBOS1	A0A0B4J2F0	54 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	TYMS	P04818	313 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	STAG3L2	P0CL84	134 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	STAG3L3	P0CL85	134 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	AMT	P48728	403 aa		10.75	□□□□□ -0.69
CHRNA7-223	ENST00000637033	LCN2	P80188	198 aa		10.75	□□□□□ -0.69

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