RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 RBMS3Q6XE24 437 aaKnown RBP4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 TGIF2LXQ8IUE1 241 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 TEX45Q8NA69 505 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 CLRN3Q8NCR9 226 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 SLC24A4Q8NFF2 622 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR10G4Q8NGN3 311 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 CLDND2Q8NHS1 167 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 P2RX4Q99571 388 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 CLEC7AQ9BXN2 247 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 NPCDR1Q9BY65 106 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 ACTR3CQ9C0K3 210 aaPredicted RBP4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 COMMD5Q9GZQ3 224 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 PLEKHA3Q9HB20 300 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 PATZ1Q9HBE1 687 aaKnown RBP4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 KCNIP2Q9NS61 270 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 TNCP24821 2201 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 MALRD1Q5VYJ5 2156 aa4.5□□□□□ -1.69
SYNGAP1-218ENST00000636905 ABCA4P78363 2273 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 IGHV2-26A0A0B4J1V2 119 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 LOC102723971A0A1B0GUV8 181 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 A0A1W2PN81 502 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 MED19A0JLT2 244 aaPredicted RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 MAP1LC3B2A6NCE7 125 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 A6NNC1 897 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 SEC14L6B5MCN3 397 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 M0R1W7 72 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RRHO14718 337 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 CA2P00918 260 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 IGKV1-16P04430 117 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 SAA1P0DJI8 122 aaPredicted RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 IGFBP2P18065 325 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 MAS1LP35410 378 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 CHRNA7P36544 502 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 OPRK1P41145 380 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 NPBWR1P48145 328 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RPL8P62917 257 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ERHP84090 104 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RAB31Q13636 194 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ICAM4Q14773 271 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ZNF726P1Q15940 193 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 BSXQ3C1V8 233 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 AVPI1Q5T686 147 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ACSM6Q6P461 480 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 LCN15Q6UWW0 184 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 TREML4Q6UXN2 200 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 C1orf122Q6ZSJ8 110 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RPP25LQ8N5L8 163 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR10G9Q8NGN4 311 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR10G7Q8NGN6 311 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RCC1LQ96I51 464 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RNF5Q99942 180 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 RARRES2Q99969 163 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 MAP1LC3BQ9GZQ8 125 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 NDUFA4L2Q9NRX3 87 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ZNRD1Q9P1U0 126 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 INSIG2Q9Y5U4 225 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 CFAP47Q6ZTR5 3102 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 ATMQ13315 3056 aa4.49□□□□□ -1.69
SYNGAP1-218ENST00000636905 BOD1L1Q8NFC6 3051 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 LOC105371242A0A075B767 164 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 IGHV1-3A0A0C4DH29 117 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 A0A1B0GV50 99 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 SMCO3A2RU48 225 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 FAM74A7A6NL05 159 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 LY6LH3BQJ8 138 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 BUB1B-PAK6H3BSN5 160 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 TSPAN4O14817 238 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 TSPAN9O75954 239 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 F12P00748 615 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 IGLV2-23P01705 113 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR13C7P0DN81 318 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 RNASE2P10153 161 aaKnown RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 BCL2P10415 239 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 GPX4P36969 197 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 GPR6P46095 362 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 RPL29P47914 159 aaKnown RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 UQCRFS1P47985 274 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 CDC34P49427 236 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 PSMB3P49720 205 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 EFNA4P52798 201 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 ELLP55199 621 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 DIAPH2-AS1Q14236 149 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 RHEBQ15382 184 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 HAGHQ16775 308 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 FAM74A3Q4VXF1 159 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 TEPPQ6URK8 271 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 TMEM144Q7Z5S9 345 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 MMD2Q8IY49 270 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 KIR3DL3Q8N743 410 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 Q8N7P7 452 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 OR11H6Q8NGC7 330 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 RXFP4Q8TDU9 374 aa4.48□□□□□ -1.69
SYNGAP1-218ENST00000636905 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms