RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 OR5R1Q8NH85 324 aa11.98□□□□□ -0.49
GABRB3-219ENST00000636466 SNRNP40Q96DI7 357 aaKnown RBP11.98□□□□□ -0.49
GABRB3-219ENST00000636466 PITPNC1Q9UKF7 332 aa11.98□□□□□ -0.49
GABRB3-219ENST00000636466 HELZP42694 1942 aaKnown RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 A1L4Q6 167 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 CD24P25063 80 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 TFF3Q07654 80 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 GGNQ86UU5 652 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 LSM10Q969L4 123 aaKnown RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 TMEM106BQ9NUM4 274 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 PRB4P10163 310 aaPredicted RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 TCTEX1D1Q8N7M0 179 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 FAM131CQ96AQ9 280 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 SMIM8Q96KF7 97 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 DNAJC4Q9NNZ3 241 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 IGLV3-32A0A0A0MS00 114 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 PTBP3O95758 552 aaKnown RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 ZNF430Q9H8G1 570 aaPredicted RBP11.97□□□□□ -0.49
GABRB3-219ENST00000636466 CCDC168Q8NDH2 2452 aa11.97□□□□□ -0.49
GABRB3-219ENST00000636466 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.49
GABRB3-219ENST00000636466 STPG3Q8N7X2 389 aa11.96□□□□□ -0.49
GABRB3-219ENST00000636466 ZNF729A6NN14 1252 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-219ENST00000636466 DLL1O00548 723 aa11.96□□□□□ -0.49
GABRB3-219ENST00000636466 APCSP02743 223 aa11.96□□□□□ -0.49
GABRB3-219ENST00000636466 VPS25Q9BRG1 176 aa11.96□□□□□ -0.49
GABRB3-219ENST00000636466 TRAV24A0A0B4J272 114 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 MGPP08493 103 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 ATP5J2P56134 94 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 ELOBQ15370 118 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 SH2D7A6NKC9 451 aaPredicted RBP11.96□□□□□ -0.5
GABRB3-219ENST00000636466 IGHV3-23P01764 117 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 SMDT1Q9H4I9 107 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 OTOGLQ3ZCN5 2332 aa11.96□□□□□ -0.5
GABRB3-219ENST00000636466 IGKV1-27A0A075B6S5 117 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 SELENOTP62341 195 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 ANAPC1Q9H1A4 1944 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-219ENST00000636466 TRBV23-1A0A0A0MS06 115 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 RAMP3O60896 148 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 ACAA1P09110 424 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-219ENST00000636466 C8orf88P0DMB2 117 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 SSX8Q7RTT4 187 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 TSC2P49815 1807 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
GABRB3-219ENST00000636466 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-219ENST00000636466 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 WDFY1Q8IWB7 410 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 CLEC7AQ9BXN2 247 aa11.95□□□□□ -0.5
GABRB3-219ENST00000636466 NLRC5Q86WI3 1866 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 ANKHD1Q8IWZ3 2542 aaKnown RBP11.94□□□□□ -0.5
GABRB3-219ENST00000636466 TEX50A0A1B0GTY4 177 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 RIGQ13278 110 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-219ENST00000636466 LOC105371242A0A075B767 164 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 NDUFA2O43678 99 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 AGAP20933 346 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 HIST1H2BAQ96A08 127 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 LILRA1O75019 489 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 FAM106CPP0CH98 169 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 IGFBP2P18065 325 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 CRYGSP22914 178 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 Q1RN00 199 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 BIVMQ86UB2 503 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 MRPL37Q9BZE1 423 aaKnown RBP11.94□□□□□ -0.5
GABRB3-219ENST00000636466 KCNMB2Q9Y691 235 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 PLXNA3P51805 1871 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 FAM89BQ8N5H3 189 aa11.94□□□□□ -0.5
GABRB3-219ENST00000636466 OTX1P32242 354 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-219ENST00000636466 GFRA1P56159 465 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 LCN2P80188 198 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 NEU1Q99519 415 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 A8MWL6 223 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 J3QW42 95 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
GABRB3-219ENST00000636466 LIPFP07098 398 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 PPOXP50336 477 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 BMPERQ8N8U9 685 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 HSPB7Q9UBY9 170 aa11.93□□□□□ -0.5
GABRB3-219ENST00000636466 APOBEC3AP31941 199 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-219ENST00000636466 BMI1P35226 326 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms