RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 OR9G4Q8NGQ1 327 aa14.06□□□□□ -0.16
CLN6-214ENST00000636314 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
CLN6-214ENST00000636314 SMAD5-AS1Q9Y6J3 95 aa14.06□□□□□ -0.16
CLN6-214ENST00000636314 LYSTQ99698 3801 aa14.06□□□□□ -0.16
CLN6-214ENST00000636314 A0A1B0GW64 132 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 E7EUB6 86 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 GPR31O00270 319 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 DHFRP00374 187 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 GP9P14770 177 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 MYOD1P15172 320 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 AREGP15514 252 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 ZNF182P17025 639 aaPredicted RBP14.05□□□□□ -0.16
CLN6-214ENST00000636314 ERVK-16P61578 105 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 TSPAN5P62079 268 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 TATDN3Q17R31 274 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 C15orf32Q32M92 178 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 C19orf35Q6ZS72 473 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 LYSMD2Q8IV50 215 aa14.05□□□□□ -0.16
CLN6-214ENST00000636314 UPK2O00526 184 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 PGLYRP1O75594 196 aaPredicted RBP14.04□□□□□ -0.16
CLN6-214ENST00000636314 F2RP25116 425 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 PSMB6P28072 239 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
CLN6-214ENST00000636314 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 RCHY1Q96PM5 261 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 COMMD5Q9GZQ3 224 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 FBXL7Q9UJT9 491 aa14.04□□□□□ -0.16
CLN6-214ENST00000636314 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
CLN6-214ENST00000636314 BMPR1BO00238 502 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 IGLV1-51P01701 117 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 RPA2P15927 270 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 S100GP29377 79 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 ALDH3B2P48448 385 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 PHLDA2Q53GA4 152 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 DGCR14Q96DF8 476 aaKnown RBP14.03□□□□□ -0.16
CLN6-214ENST00000636314 EXTL2Q9UBQ6 330 aa14.03□□□□□ -0.16
CLN6-214ENST00000636314 TRAV3A0A0B4J244 114 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 MARCH11A6NNE9 402 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 REG1AP05451 166 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 CRYGCP07315 174 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 FGF2P09038 288 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 DEFA4P12838 97 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 CTRB1P17538 263 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 OR2B8PP59922 312 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 CTRB2Q6GPI1 263 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 LPCAT3Q6P1A2 487 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 PALMDQ9NP74 551 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
CLN6-214ENST00000636314 PEMTQ9UBM1 199 aa14.02□□□□□ -0.17
CLN6-214ENST00000636314 CGB1A6NKQ9 187 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 LYL1P12980 280 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 HIST1H1BP16401 226 aaKnown RBP14.01□□□□□ -0.17
CLN6-214ENST00000636314 LPAR6P43657 344 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 SBSPONQ8IVN8 264 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 FCAMRQ8WWV6 532 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 FANCD2OSQ96PS1 177 aa14.01□□□□□ -0.17
CLN6-214ENST00000636314 QTRT1Q9BXR0 403 aaKnown RBP14.01□□□□□ -0.17
CLN6-214ENST00000636314 EPPK1P58107 5090 aaKnown RBP14□□□□□ -0.17
CLN6-214ENST00000636314 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
CLN6-214ENST00000636314 M0QYG6 137 aa14□□□□□ -0.17
CLN6-214ENST00000636314 NDUFB8O95169 186 aa14□□□□□ -0.17
CLN6-214ENST00000636314 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
CLN6-214ENST00000636314 IL34Q6ZMJ4 242 aa14□□□□□ -0.17
CLN6-214ENST00000636314 CLVS1Q8IUQ0 354 aaPredicted RBP14□□□□□ -0.17
CLN6-214ENST00000636314 SLC38A6Q8IZM9 456 aa14□□□□□ -0.17
CLN6-214ENST00000636314 EEF1AKMT3Q96AZ1 226 aa14□□□□□ -0.17
CLN6-214ENST00000636314 SRSF8Q9BRL6 282 aaKnown RBP14□□□□□ -0.17
CLN6-214ENST00000636314 PPP5D1E7EU14 171 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 H0Y980 276 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 RGS5O15539 181 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 KRASP01116 189 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 IFNA6P05013 189 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 CSN3P07498 182 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 G6PCP35575 357 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 SPCS2Q15005 226 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 ZNF585BQ52M93 769 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 RNASE10Q5GAN6 216 aaKnown RBP13.99□□□□□ -0.17
CLN6-214ENST00000636314 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 OR52I2Q8NH67 350 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 C15orf40Q8WUR7 153 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 SIGLEC8Q9NYZ4 499 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 KLK11Q9UBX7 282 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 S4R3C0 116 aa13.99□□□□□ -0.17
CLN6-214ENST00000636314 IGLV11-55A0A075B6I3 123 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 GGCTO75223 188 aaKnown RBP13.98□□□□□ -0.17
CLN6-214ENST00000636314 SNAPC5O75971 98 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 TPPPO94811 219 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 UCP3P55916 312 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 OR1L8Q8NGR8 309 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 RAB2BQ8WUD1 216 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 CCDC140Q96MF4 163 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
CLN6-214ENST00000636314 DNAH1Q9P2D7 4330 aa13.97□□□□□ -0.17
CLN6-214ENST00000636314 LCE6AA0A183 80 aa13.97□□□□□ -0.17
CLN6-214ENST00000636314 CYB5BO43169 146 aa13.97□□□□□ -0.17
CLN6-214ENST00000636314 HLA-AP01891 365 aaKnown RBP13.97□□□□□ -0.17
CLN6-214ENST00000636314 TRAPPC2P0DI81 140 aa13.97□□□□□ -0.17
CLN6-214ENST00000636314 TRAPPC2BP0DI82 140 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms