RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PRB1P04280 392 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 DVL1P1P54792 670 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 RPS16P62249 146 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 CCL20P78556 96 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 PAX2Q02962 417 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 PRB3Q04118 309 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 BSXQ3C1V8 233 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 TMEM167AQ8TBQ9 72 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 SCGB1C1Q8TD33 95 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 RITA1Q96K30 269 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 CARHSP1Q9Y2V2 147 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 OR51B2Q9Y5P1 312 aa10.12□□□□□ -0.79
CACNA1A-219ENST00000635917 LRRK2Q5S007 2527 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 SVEP1Q4LDE5 3571 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 TEX50A0A1B0GTY4 177 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 A0A1B0GW64 132 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 H7C2Y5 167 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 M0R1W7 72 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 MC5RP33032 325 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 GPR6P46095 362 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 PRRX1P54821 245 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 AKR1C8PQ5T2L2 129 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 HCP5Q6MZN7 132 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 OR11H6Q8NGC7 330 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 OR5B3Q8NH48 314 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 C1orf159Q96HA4 380 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 GGACTQ9BVM4 153 aa10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 MS4A7Q9GZW8 240 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-219ENST00000635917 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 CGB1A6NKQ9 187 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 E7EUB6 86 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 INS-IGF2F8WCM5 200 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IFNA10P01566 189 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IGKV1D-33P01593 117 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IGKV1-33P01594 117 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IL3RAP26951 378 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 RAB13P51153 203 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 SLC25A24Q6NUK1 477 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 LFNGQ8NES3 379 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 UNKLQ9H9P5 680 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 NDUFA4L2Q9NRX3 87 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 hCG_1809904A0A1W2PP81 198 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 A0A1W2PPE2 198 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 A0A1W2PR64 198 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 A0A1W2PRV1 198 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 IGHV2-5P01817 119 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 APOC3P02656 99 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 ZFP36P26651 326 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 HOXA1P49639 335 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 GUK1Q16774 197 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 ACSM6Q6P461 480 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 C1orf122Q6ZSJ8 110 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 SSX7Q7RTT5 188 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 OR4A5Q8NH83 315 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 MBD3L1Q8WWY6 194 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 NARS2Q96I59 477 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 NPCDR1Q9BY65 106 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 FKBP11Q9NYL4 201 aa10.1□□□□□ -0.79
CACNA1A-219ENST00000635917 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 A0A1W2PPI3 338 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 BTBD17A6NE02 478 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 ODF3BA8MYP8 253 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 CRYGBP07316 175 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 PRTN3P24158 256 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 CD1BP29016 333 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 ARF6P62330 175 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 DLK1P80370 383 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 TLE4Q04727 773 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 RCC1LQ96I51 464 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 TREM1Q9NP99 234 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 ONECUT1Q9UBC0 465 aa10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 LSM4Q9Y4Z0 139 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 KLF2Q9Y5W3 355 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-219ENST00000635917 CA2P00918 260 aa10.08□□□□□ -0.8
CACNA1A-219ENST00000635917 FGF7P21781 194 aa10.08□□□□□ -0.8
CACNA1A-219ENST00000635917 NPY1RP25929 384 aa10.08□□□□□ -0.8
CACNA1A-219ENST00000635917 LGALS7P47929 136 aa10.08□□□□□ -0.8
CACNA1A-219ENST00000635917 LMO4P61968 165 aa10.08□□□□□ -0.8
CACNA1A-219ENST00000635917 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms