RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 TCEAL2Q9H3H9 227 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 EDA2RQ9HAV5 297 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PARP11Q9NR21 331 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 EHFQ9NZC4 300 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 LAMTOR3Q9UHA4 124 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 CELA1Q9UNI1 258 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 WASHC3Q9Y3C0 194 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 YTHDF2Q9Y5A9 579 aaKnown RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 NUP210LQ5VU65 1888 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 MYO5CQ9NQX4 1742 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 RPRD2Q5VT52 1461 aaKnown RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 KIF13AQ9H1H9 1805 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TCHHQ07283 1943 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SCN11AQ9UI33 1791 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 RIC1Q4ADV7 1423 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 MAPKBP1O60336 1514 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 hCG_1818297A0A087WSY0 165 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TRAV8-2A0A0B4J237 113 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 A0A0B4J2A0 478 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 IGHV1-69-2A0A0G2JMI3 117 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 MYBPHLA2RUH7 354 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 C5orf49A4QMS7 147 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 OR4C45A6NMZ5 311 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 NCBP2LA6PVI3 153 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 KNCNA6PVL3 124 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 A8MT66 165 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 C11orf98E9PRG8 122 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF670-ZNF695F2Z2N8 137 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 H0YJW9 148 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 H7BYZ3 331 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 DEDDO75618 318 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 CA2P00918 260 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 IGKV1D-16P01601 117 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 IGHMP01871 453 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ATP5G1P05496 136 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 NMBP08949 121 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 MMP7P09237 267 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 HOXB7P09629 217 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 SPINK8P0C7L1 97 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PGA4P0DJD7 388 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PGA3P0DJD8 388 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PGA5P0DJD9 388 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 FABP4P15090 132 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 OR10J1P30954 320 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PPP1CCP36873 323 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 CTRLP40313 264 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 LPAR6P43657 344 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 NUDT2P50583 147 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 LIM2P55344 173 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TIMM10P62072 90 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 HMGN3Q15651 99 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 C12orf74Q32Q52 190 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 Q499Y3 187 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 LRRC10Q5BKY1 277 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 VAX1Q5SQQ9 334 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 C10orf91Q5T1B1 145 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TSPO2Q5TGU0 170 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 KDM4DQ6B0I6 523 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ALKAL2Q6UX46 152 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 FOXI2Q6ZQN5 318 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TCF23Q7RTU1 214 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 SGPP2Q8IWX5 399 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 EXOC3-AS1Q8N2X6 119 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TTC9CQ8N5M4 171 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TEX29Q8N6K0 151 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 Q8N7P7 452 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 LINC00301Q8NCQ3 95 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 OR2A1Q8NGT9 310 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 OR8S1Q8NH09 359 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF564Q8TBZ8 553 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PSMF1Q92530 271 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM230Q96A57 120 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 MAGOHBQ96A72 148 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 OR4C12Q96R67 309 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 METTL26Q96S19 204 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 GNB1LQ9BYB4 327 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM133Q9H2Q1 129 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 BANF2Q9H503 90 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ESM1Q9NQ30 184 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 EXOSC3Q9NQT5 275 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 MARCH5Q9NX47 278 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 FKBP11Q9NYL4 201 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 SHPKQ9UHJ6 478 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 FUT9Q9Y231 359 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 POMPQ9Y244 141 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 KLF13Q9Y2Y9 288 aaPredicted RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 NOP16Q9Y3C1 178 aaKnown RBP2.18□□□□□ -2.06
CNOT1-223ENST00000628857 ORC6Q9Y5N6 252 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 INSIG2Q9Y5U4 225 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 PRXQ9BXM0 1461 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 SYNJ1O43426 1573 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 KDM5CP41229 1560 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 FRMPD1Q5SYB0 1578 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 LAMB4A4D0S4 1761 aa2.18□□□□□ -2.06
CNOT1-223ENST00000628857 CASKIN1Q8WXD9 1431 aa2.17□□□□□ -2.06
CNOT1-223ENST00000628857 CLASP1Q7Z460 1538 aa2.17□□□□□ -2.06
CNOT1-223ENST00000628857 SYCP2Q9BX26 1530 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms